| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0035 |
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| Symbol | |
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| ID | 4012408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 37198 |
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| End bp | 38217 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637939721 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_546900 |
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| Protein GI | 91785948 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG TCACCCGCCG CAGCGTCCTG CGCACCCTGT CCGCCGTCCC TGCGGCCGGC
ATTGCCGCAG CCCTGCCCTC GATGGCGCGC GCCGCCGAGT TTTCCTACAA ATACGGCAAC
AACCTGCCCG TCACCCATCC GCTGAACATC CGCGCCCAGC AGGCCGCCGA CCGCATCCTG
AAAGAAACGA ACGGCCGGGT CGAGATCAAG ATCTTCCCGA ACAACCAGCT CGGCGGTGAC
ACCGACATGC TGGCGCAGGT GCGCTCCGGC GGCATCGAGT TCTTCACGCC CTCGGCGCTG
GTCATCGCCA CGCTGGTGCC GGTGGCGGCC ATCAATGCCG TCGGCTTTGC GTTCTCCGAC
TACAACCAGG TCTGGGGCGC GATGGACGGC AAGCTGGGCG CGCATGTGCG TGAGGCCATC
AGCAAGTCAC GGCTGTATGC GTTTGAAAAA ATGTGGGACA ACGGTTTCCG CCAGACCACC
AGCAGCAAGG CACCCGTCAC CAGCGCGAAA GACATGGACG GCCTGAAGAT CCGCGTGCCG
GTCAGCCCGC TGTCGATCTC GATGTTCAAG GGCCTGGGCG CCGCGCCGGC CAGCCTGCAG
TTCAGCGAGG TGTATTCCTC GCTGCAGACC AAGATCGTCG ACGCCCAGGA AAACCCGCTG
CCCATCATCC AGGTGGCCAA GCTGTACGAA GTGCAGAAGT TCTGCTCGAT GACCAACCAC
ATCTGGGATG GCTACTGGTT CATCGCCAAC GGCCGCGCCT GGGAAAAACT GCCCGCCGAC
CTGAAAACCA TCGTGGCGCG CGCCATCAAT GAAGCTGGCC TGCAGCAGCG CGACGACATC
AAGAAGCTCA ACGAAACCGT CGCCGCCGAC CTGCAGTCCA AGGGCCTAGC CATCAACCGG
CCGGCCTCCG ACAGCTTCCG GGCCAAGCTG CGCGAAGCCG GGTTTTATGG CGAGTGGAAG
GGCCGCTTCG GCGACGAGGC CTGGGGCCTG TTGGAGCAGT CGGTCGGCAA GCTGGCGTAG
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| Protein sequence | MTEVTRRSVL RTLSAVPAAG IAAALPSMAR AAEFSYKYGN NLPVTHPLNI RAQQAADRIL
KETNGRVEIK IFPNNQLGGD TDMLAQVRSG GIEFFTPSAL VIATLVPVAA INAVGFAFSD
YNQVWGAMDG KLGAHVREAI SKSRLYAFEK MWDNGFRQTT SSKAPVTSAK DMDGLKIRVP
VSPLSISMFK GLGAAPASLQ FSEVYSSLQT KIVDAQENPL PIIQVAKLYE VQKFCSMTNH
IWDGYWFIAN GRAWEKLPAD LKTIVARAIN EAGLQQRDDI KKLNETVAAD LQSKGLAINR
PASDSFRAKL REAGFYGEWK GRFGDEAWGL LEQSVGKLA
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