| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7271 |
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| Symbol | |
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| ID | 6280647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010679 |
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| Strand | + |
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| Start bp | 25549 |
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| End bp | 27171 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642619450 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001893485 |
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| Protein GI | 187921896 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.839285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGCGA CAGTTTCTTC ACATGAAAGC AAGAGCTGGC GGTACCTCGC GACATTGTGG
ACTGGAGGCT GCATCGCGCT CGGAGCCGTT ACCGCAGCCT GTGTCCTGTG GGACCAGGAA
CTGGGCACTG CCGGCTTCTG TCTTCTCGTT GTCGTTGTTC TTCTGTCGCT GCTGGACAAC
TTCATTTCAT CCGCGCTTTT CTCGGTCATT GGCGCGATGC TCCTCGGGTA TTTTTTCACG
GAACCGGTCC ATAGCATCCA CGTTAGCAAA CCCCGGGATT TATTCTCCCT GCTTGCCTTT
CTCGTCACGT CGATCGCAAT TACTACCTTT GTCAGGCGAA TTCGTCGCGT GGAGAAAACG
CAGCGCGCTC AGGCGCAGTT GCTGGAACTG ACTCACGACA TCATCATCGT ACGCGATAAG
GACGACGTGA TTACGTACTG GAATCAGGCG GCGGAAATAC TCTATGGATG GACCAAGGAA
GAGGCGATTG GCGAGTTCAT CGACGAACTT CTGAGTTCGG TGTTCCCCCT GCCCCGTGAC
CAGCTCCAGC GGATTTTTCA TCGCGACGGT CAGTGGGAGG GCGAGCTGAT TCACACGAGG
CGGGATGGCA CCAAAATAAT CGTGACGAGC CGTTGGGCAC TACAGCGCGA CAGCGCGGGC
AATCCCTTAG CCACACTTGA GACCAATAAT GACATCACGC AGCGCAGGCA CGCCGAGGAC
CTGCTGCGAA AGAGTCAGGC GCAATATTTC GCCGAAGCGC AGAAACTGAG CAGGACCGGA
AGCTTTGGAT GGAACATTTC GAGCGGCGAA CTCTTCTGGT CCGACGAGAC TTTTTCCATC
TTCGAATACG ACTTGGCCGT CGCGCCCAAC ATCGAGTTGG TCCGGCAGCG CGTATATCCA
GACGATCTCC CCCTGTTCGA CGAGAAGATT GCAAGGGCGC GTGGTTTCAC TGTCGACTTT
GACATCGAGC ATCGTCTGCT TTTTCCTGAT GGACGCATCA AGCACCTCCA TGTGGTGGGC
AGGTCAGCGA GCGGTCAGCC GGATAACCGG GCGTTCATCG GAGCGGTAAT GGACGTGACC
GGCGCGAAAC AAACGGAGGA GCAGTTACGG CATACGCAAA GCGAACTTGA ACGCGTAAGC
CGGATAACGG CGCTGGGCGA GCTGAGTGCG TCAATTGCTC ACGAAGTAGG ACAGCCCCTC
GCCGCCATCG TCACGAGCGG TGAAGCATGT CTGCGCTGGC TGCATCGCCA GCCACCGAAC
ATGGAAGAAA TAGAGGGTTG CGTGAGTCAC ATGACAGACC AGGGCAATCG CGCCGCAGCG
ATCGTGCAAC GTGTGCGGGC ACTCATGAAG GGGGCGCCGC CGGACCGGGC ACCAATCGCA
ATCAACGACG TGATTGGCAA GGCGATCAAT TCACACACGT CACCCAAAAA TCAACGTCGG
CATTACCGTT CCAAATCTGG CTCGTGGCAT TCCAATCGTA CTGCCCGTTT CCATTCGGGC
CAGCAGCGGG CCATACGTGA TTTATGCCGC CCTCCGGGTA TCCAGAAGAT CCCGCCACGA
AGCAGAACGA GTGCCATCCC AAATCCGGCG ATGTCGATTG GGACACGTCA TACAAGGCGC
TGA
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| Protein sequence | MRATVSSHES KSWRYLATLW TGGCIALGAV TAACVLWDQE LGTAGFCLLV VVVLLSLLDN
FISSALFSVI GAMLLGYFFT EPVHSIHVSK PRDLFSLLAF LVTSIAITTF VRRIRRVEKT
QRAQAQLLEL THDIIIVRDK DDVITYWNQA AEILYGWTKE EAIGEFIDEL LSSVFPLPRD
QLQRIFHRDG QWEGELIHTR RDGTKIIVTS RWALQRDSAG NPLATLETNN DITQRRHAED
LLRKSQAQYF AEAQKLSRTG SFGWNISSGE LFWSDETFSI FEYDLAVAPN IELVRQRVYP
DDLPLFDEKI ARARGFTVDF DIEHRLLFPD GRIKHLHVVG RSASGQPDNR AFIGAVMDVT
GAKQTEEQLR HTQSELERVS RITALGELSA SIAHEVGQPL AAIVTSGEAC LRWLHRQPPN
MEEIEGCVSH MTDQGNRAAA IVQRVRALMK GAPPDRAPIA INDVIGKAIN SHTSPKNQRR
HYRSKSGSWH SNRTARFHSG QQRAIRDLCR PPGIQKIPPR SRTSAIPNPA MSIGTRHTRR
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