| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7236 |
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| Symbol | |
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| ID | 6279427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3621722 |
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| End bp | 3623359 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642618256 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001890892 |
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| Protein GI | 187921860 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG GGTTCACCGC GCCGCCGCCG AGCGGGCAAC TGCTGCCATT CCGCGAATCG
CTGCTGGCGA TGCTCGGCAT CGCTTTCGTC GCGATGCTGG TGGCGCTGGA TCAGACCATC
GTCGGCACCG CGCTGCCGCG CATCGTCGCC GACCTGAAGG GATTCGATCT TTACGCGTGG
GTCGCGACGT CGTACATGCT GGCCTCCGTC ATCACGATTC CCATCTTCGG GCGGTTGGGC
GATCTGTTTG GCCGCAAGCG GTTTCTGATC GCGGCGATCC TCCTATTCAC CGGCGCATCC
GTGTTGTGCG GCTTGGCCAA CAGCATGCTG TTGCTGGTGG TTTCGCGTGG ACTGCAAGGG
ATTGGCGGCG GCATTCTGAT CGGCACGGTG TTCGCCACCG TCGCCGATCT GTTCCCCAAT
CCGAAACTGC GGCTGCGTTG GCTTGCGTTC GTTACGTCCG CGTTCGGCGT GTCCAATATG
ATCGGACCGA CGCTCGGCGG AATGCTCACG CAATACGGCG GTTGGCGGCT GGTGTTTTTC
GTCAACGTGC CGGTCGGGCT CGTCTCGCTG CTGTTCGTGC AACGCTTTTT GCCCCCGCTG
CTTCATCTAA GGTGCAAAGG TCCCGTGCGG CTCGACTGGC TCGGCGCGTT CGTGCTCGCG
GTCACGTTCG GCTCACTGCA GGTGCTCATC GAACTGTTTC CGAGGCGCGG CATCGACACG
ACGACCATCG TGCTGACCGT CGTAGCGGCG ACCTGCGGGC TGATTCTCTG GCTATGGGAG
CGGCGCATCG GCTATCCGAT CGTGCCGGTG GACATGCTCA TGGACCGCAA GCTCTCCGCG
CTCTTCGCGA TGTCGGTGCT CGGCGGCTTC GCGCTCTTTT CGCTGGTGTT TTATGTGCCG
CTGCTGTTTC AGGGCGGCTA CGCGATGTCC GCGCATGACT CGGGCATGCT GATCACACCA
TTGCTGCTGG GCACGACCGT GGGCAGCGTG CTCAACAATC GAATCGTCAC ACGGGTCCGC
CGCGCGAACG GCATCATGTA TGTCGGCTTT GCGCTGTCCG CGCTCGCCTG TTTGAGCGTG
GTCGTCTTGC GAGGTACGGA ACCGCATCTC GTGTGGGCTT CGTGCATGGG CATCAGCGGG
CTCGGCCTCG GTCTGGTGGC CACCAGCCTG ACCGTCTGTT CACAGCAGAT CGTCGGGCGG
GACCATGTCG GCGCGGCCAC CGCGCTGCTT CAATCGCTGC GGACATTCGG CGGCATGTTG
GGCACGGTGA TGACGGGCGC GTTGCTCGGC CACCTCTATT CGCGCGGCGT GCATCGCTCG
CTCGACTCCT ATCAGGCGAC GCAGTGGTTC AAATCCTTCG CCAGTCCCGA GTTGCTGGTG
GATCGCGCGG AACAGGCCGC GCTGATCAAT CGTCTGGTGA GTGCCGGCCA GTCAGGCGAC
GCCATGATGA GATCCGCGCG CGAAGCCCTG GTGCAGTCCA TTCACATCGG CATTCTGGTG
GCCGGCGCGG CGGCGTTGAT CGGGTTGTGC CTCGCCTGGT TCGTGCCGCC GGTGCGCATC
AGCTACCCGG AAACCGAACT CGCGCCGGAT GGGCAACCAC CCGCCGACGC CCTTCCCCCG
CACCGCAGCG TACTTTGA
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| Protein sequence | MSTGFTAPPP SGQLLPFRES LLAMLGIAFV AMLVALDQTI VGTALPRIVA DLKGFDLYAW
VATSYMLASV ITIPIFGRLG DLFGRKRFLI AAILLFTGAS VLCGLANSML LLVVSRGLQG
IGGGILIGTV FATVADLFPN PKLRLRWLAF VTSAFGVSNM IGPTLGGMLT QYGGWRLVFF
VNVPVGLVSL LFVQRFLPPL LHLRCKGPVR LDWLGAFVLA VTFGSLQVLI ELFPRRGIDT
TTIVLTVVAA TCGLILWLWE RRIGYPIVPV DMLMDRKLSA LFAMSVLGGF ALFSLVFYVP
LLFQGGYAMS AHDSGMLITP LLLGTTVGSV LNNRIVTRVR RANGIMYVGF ALSALACLSV
VVLRGTEPHL VWASCMGISG LGLGLVATSL TVCSQQIVGR DHVGAATALL QSLRTFGGML
GTVMTGALLG HLYSRGVHRS LDSYQATQWF KSFASPELLV DRAEQAALIN RLVSAGQSGD
AMMRSAREAL VQSIHIGILV AGAAALIGLC LAWFVPPVRI SYPETELAPD GQPPADALPP
HRSVL
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