Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7227 |
Symbol | |
ID | 6277858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3612132 |
End bp | 3613157 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642618247 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_001890883 |
Protein GI | 187921851 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACC TCGCGAGACG CACCCTGTTG CGTGCGGCGG CCGCTGTGCC GGTAGCCGGC GCGCTGGGCT TTCCGGCAAT CGTGCGCGCG GCGTCCGGCC CGGAGTTCGT GTTCAAGTAC GGCAACAACC TGCCGCTTAC GCATCCGCTG AACGTGCGCT CGCAAGAGGC CGCGAATCAG ATCAAGGAGG CGTCGAAAGG GCGCATGGAG ATCCGGATAT TCCCTAACAA CCAGTTGGGC GGCGACACCG ACATGCTCGC GCAGGTGCGC AGCGGCGGCA TCGAAATGTT CACGCCGTCG GCGTTGGTGG TGTCGACGCT CGCACCGTCG GTTGCGATCA ACGCGGTGGG CTTCGCGTTC AGCGACTACA ACCAGGTCTG GGGCGCCATG GACGGCAAGC TCGGCGCATA CGTGCGCGCC GCGATGCAGA AGGCCGGGCT CGAATCGTTC GAAAAGATGT GGGACAACGG CTTTCGTCAA ACCACCACGA GCAATGGTCC CATTACGAGT GCGCAGACCA TGCGCGGTCT GAAGATTCGC GTGCCGGTGA GTCCGCTGAG CATCGATATG TTCAAGGGAC TCGGCGCTTC GCCGACCAGC CTGCAATTCA GCGAGGTCTA TTCGTCGCTG CAAACGCATA TCGTCGATGC GCAGGAAAAT CCGCTGCCGA TCGTGCAGGT CGCGAAACTC TACGAAGTGC AGAAGTACTG CTCGCTCACC AATCACATGT GGGACGGCTA CTGGTTCGTG CTGAACCCGC GCGCCTGGCA GCGCTTGCCG AAGGATCTGC AGGGCATTGC CAGCGATGCG TTCAACCAGT CGGCGTTGAA GCAACGTGAA GACGTGCGCA AGCTGAACGA TGCGGCGGTC GCGGATTTGC AAAGCAAGGG CCTGTCGATC AACCGTCCCA CGCCGGACAC ATTCCGCGCG GCGCTGCGTC AGGCCGGCTT CTACGCCGAA TGGAAGAGCA AGTTCGGCAA TCAGGCGTGG GACCTCCTCG AACAGTCGGT CGGCAAGCTG GCTTGA
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Protein sequence | MTNLARRTLL RAAAAVPVAG ALGFPAIVRA ASGPEFVFKY GNNLPLTHPL NVRSQEAANQ IKEASKGRME IRIFPNNQLG GDTDMLAQVR SGGIEMFTPS ALVVSTLAPS VAINAVGFAF SDYNQVWGAM DGKLGAYVRA AMQKAGLESF EKMWDNGFRQ TTTSNGPITS AQTMRGLKIR VPVSPLSIDM FKGLGASPTS LQFSEVYSSL QTHIVDAQEN PLPIVQVAKL YEVQKYCSLT NHMWDGYWFV LNPRAWQRLP KDLQGIASDA FNQSALKQRE DVRKLNDAAV ADLQSKGLSI NRPTPDTFRA ALRQAGFYAE WKSKFGNQAW DLLEQSVGKL A
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