Gene Bphyt_7210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7210 
Symbol 
ID6278774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3596710 
End bp3597792 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content64% 
IMG OID642618230 
ProductABC transporter related 
Protein accessionYP_001890866 
Protein GI187921834 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG TGCAACTGAG CGGCATCTTC AAACGCTATG GCGACACGCA AGTGGTGCAC 
GGCATCGATC TCGACATCGA CGACGGCGAG TTCGTCGTGC TGGTCGGCCC GTCGGGCTGC
GGCAAAAGCA CGTTGATGCG CATGGTGGCG GGACTCGAGG AAATCAGCGG CGGCGATCTG
ATGATCGGCG GCACACGCGC GAACAGTCTC GCGCCGCAGC AGCGCAATAT CTCGATGGTG
TTCCAGAGCT ACGCGCTGTA TCCGCATCTG TCCGTCTACG AAAACATTGC GTTCGGACCG
CGGATTCGCA AGGAGTCGTC GGCGAGTTTC AAGCCGCGGA TCGAAGCCGC GGCGAAGATG
CTGAACCTCG GCGGCTATCT GGACCGTTTG CCGCGCGCGC TCTCGGGCGG CCAGCGGCAA
CGCGTGGCGA TGGGCCGCGC GGTGGTGCGC GAGCCGTCGC TGTTCCTGTT CGACGAGCCG
CTGTCCAATC TCGACGCCAA GCTGCGCGTG CAGATGCGCA CCGAAATCAA GGCGCTGCAT
CAGCGGCTGA AGAATACGGT GATCTACGTC ACGCACGATC AGATCGAAGC CATGACGATG
GCGGACCGCA TCGTCGTCAT GAACGCGGGG CGGATCGAGC AGATCGGCCG GCCGCTGGAA
CTGTACGACC ATCCGGCGAA TCTGTTCGTG GCGAGCTTTC TCGGCTCGCC GTCGATGAAC
TTTGCCGAAG GCGTGATCGC GAGCCGCGCG CAAGGTCAGG GCCTCGCGTT GAACCTCACG
GGTGGCGGCG AGATCGTGCT GGAAGGTGCG CCCGCGTCGG CGGTGGTCGG CGCGAAGGTC
ACGCTCGGCG TGCGGCCGGA ACACATCGAA ACCATGACGC CGACACCCGA CGCGACGATG
GAAGTCGAAG TGGTCGAGCC GACTGGCGCG GAGACTCACT TGTACGGGAA AATAGGCGGC
AGCACGTGGT GCGTGACGAC TCGTCAGCGC TCGAAAATCG AGCCCGGCCA GCGCGTCACG
CTGCGCTTGC CGGCCGAACA TATTCATCTG TTCGATACGG AGAGTGGACG CAGGCTGGTC
TGA
 
Protein sequence
MAAVQLSGIF KRYGDTQVVH GIDLDIDDGE FVVLVGPSGC GKSTLMRMVA GLEEISGGDL 
MIGGTRANSL APQQRNISMV FQSYALYPHL SVYENIAFGP RIRKESSASF KPRIEAAAKM
LNLGGYLDRL PRALSGGQRQ RVAMGRAVVR EPSLFLFDEP LSNLDAKLRV QMRTEIKALH
QRLKNTVIYV THDQIEAMTM ADRIVVMNAG RIEQIGRPLE LYDHPANLFV ASFLGSPSMN
FAEGVIASRA QGQGLALNLT GGGEIVLEGA PASAVVGAKV TLGVRPEHIE TMTPTPDATM
EVEVVEPTGA ETHLYGKIGG STWCVTTRQR SKIEPGQRVT LRLPAEHIHL FDTESGRRLV