Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7210 |
Symbol | |
ID | 6278774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3596710 |
End bp | 3597792 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618230 |
Product | ABC transporter related |
Protein accession | YP_001890866 |
Protein GI | 187921834 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGCAG TGCAACTGAG CGGCATCTTC AAACGCTATG GCGACACGCA AGTGGTGCAC GGCATCGATC TCGACATCGA CGACGGCGAG TTCGTCGTGC TGGTCGGCCC GTCGGGCTGC GGCAAAAGCA CGTTGATGCG CATGGTGGCG GGACTCGAGG AAATCAGCGG CGGCGATCTG ATGATCGGCG GCACACGCGC GAACAGTCTC GCGCCGCAGC AGCGCAATAT CTCGATGGTG TTCCAGAGCT ACGCGCTGTA TCCGCATCTG TCCGTCTACG AAAACATTGC GTTCGGACCG CGGATTCGCA AGGAGTCGTC GGCGAGTTTC AAGCCGCGGA TCGAAGCCGC GGCGAAGATG CTGAACCTCG GCGGCTATCT GGACCGTTTG CCGCGCGCGC TCTCGGGCGG CCAGCGGCAA CGCGTGGCGA TGGGCCGCGC GGTGGTGCGC GAGCCGTCGC TGTTCCTGTT CGACGAGCCG CTGTCCAATC TCGACGCCAA GCTGCGCGTG CAGATGCGCA CCGAAATCAA GGCGCTGCAT CAGCGGCTGA AGAATACGGT GATCTACGTC ACGCACGATC AGATCGAAGC CATGACGATG GCGGACCGCA TCGTCGTCAT GAACGCGGGG CGGATCGAGC AGATCGGCCG GCCGCTGGAA CTGTACGACC ATCCGGCGAA TCTGTTCGTG GCGAGCTTTC TCGGCTCGCC GTCGATGAAC TTTGCCGAAG GCGTGATCGC GAGCCGCGCG CAAGGTCAGG GCCTCGCGTT GAACCTCACG GGTGGCGGCG AGATCGTGCT GGAAGGTGCG CCCGCGTCGG CGGTGGTCGG CGCGAAGGTC ACGCTCGGCG TGCGGCCGGA ACACATCGAA ACCATGACGC CGACACCCGA CGCGACGATG GAAGTCGAAG TGGTCGAGCC GACTGGCGCG GAGACTCACT TGTACGGGAA AATAGGCGGC AGCACGTGGT GCGTGACGAC TCGTCAGCGC TCGAAAATCG AGCCCGGCCA GCGCGTCACG CTGCGCTTGC CGGCCGAACA TATTCATCTG TTCGATACGG AGAGTGGACG CAGGCTGGTC TGA
|
Protein sequence | MAAVQLSGIF KRYGDTQVVH GIDLDIDDGE FVVLVGPSGC GKSTLMRMVA GLEEISGGDL MIGGTRANSL APQQRNISMV FQSYALYPHL SVYENIAFGP RIRKESSASF KPRIEAAAKM LNLGGYLDRL PRALSGGQRQ RVAMGRAVVR EPSLFLFDEP LSNLDAKLRV QMRTEIKALH QRLKNTVIYV THDQIEAMTM ADRIVVMNAG RIEQIGRPLE LYDHPANLFV ASFLGSPSMN FAEGVIASRA QGQGLALNLT GGGEIVLEGA PASAVVGAKV TLGVRPEHIE TMTPTPDATM EVEVVEPTGA ETHLYGKIGG STWCVTTRQR SKIEPGQRVT LRLPAEHIHL FDTESGRRLV
|
| |