Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7172 |
Symbol | |
ID | 6278116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3565185 |
End bp | 3566621 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642618193 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001890829 |
Protein GI | 187921797 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCTT CGTCATCCGC CAGCGCACAC GCCGGCGCGT CCTCGCTGAT TACCTCGCTG GTCGCTGCCG CGCTGTTCAT GGAAAACCTC GACGGCTCGA TTATCGCAAC CGCGCTGCCG CAAATGGCGC ATTCGTTTCA TGTCACGCCC GTCGAACTGA GCGTCGGCAT CACCTCGTAT CTGTTGACGC TCGCGGTATT CATCCCGATC AGCGGCTGGA TTGCCGACTG GGCCGGCGTG CGCACGGTGT TCACCGCGGC GCTTGCAATC TTCACCGTCG CATCGGTGCT GTGCGGATTG ACCGACAACC TCGTCGAATT CACCGGCGCG CGGATTTTGC AAGGTATCGG CGGCGCGATG ATGGTGCCGG TCGGGCGCCT TGCCGTATTG CGCGCCACGC CCAAAGAAGG CCTGATGCGT GCGGTCTCCA TCATCACGTG GCCCGGGTTG GTCGCACCCG TTCTCGGACC GCCGCTCGGC GGCTTCATTA CGACGTACTC GTCGTGGCGC TGGATCTTCT ATCTGAACGT GCCGCTCGGA CTCGCGGGCG TGGTGTTGGC GTGGCGCTTC ATCAGCGCGG AACGCGACAC GGATCGTCGT CCGTTCGACA TGCTGGGTTT TGTGCTGACG GGCGTCGCGG GCACCTCGGT GATGTACGCG ATGGAGGCAA TCGGCCGTGT GGACTCCTCG TGGCGTATTG CGCTGGTATT TCTCGCAATC GGTCTCGCGG CTTGCGCGGG AGCGTGGTTT CATCTGCGAC GCTGCACGCA CCCGATGGTC GATCTGTCGG CGTTCCGGAT CAAGACGTTC ATGGTGGCGA TCGGCGGCGG CTCGCTGTTC CGGATTGCGA TCGGCTCGGT GCCGTTTCTA CTGCCGCTGA TGTTTCAGGT CGGCTTCGGC ATGAATCCGT TTCAGTCGGG CTTGCTGACG CTTGGCGTAT TCGCCGGCAA TCTGTCGACG AAGCTCGTCA CGACGCGGAT CTTGCGGCGC TTCGGCTTTC GCTCCGTGCT TCTCTACAAC GGCGCGTTCG CCGCGGTGAC GCTGGCGAGC ATGAGTCTGC TCACGGCCTC CACGCCATAT GGATGGATCC TCTTCGCGCT ATTCGTCAGC GGCGTCGCGC GGTCGTTGCA ATTCACGGCG ATCAATACGC TCGGTTTCGC GGATGTGCCG AAGCAGCAGA TGAGCGGCGC GTCGACCTTA TCGAGCACCT TGGGTCAGAT GACAATGGGC ATGGGCGTCG CGGCCGGCGC AATCGCATTA CGGATCGCCG CATGGTGGCA TGGACACGAT GGGCAAACAT TGGCGCCGGC TGATTTCACC ATCGCGTTTC TGGTCATGGC GGCATTGAGC GTGATCGCGG TAGTCGATGT TATTTCGTTG TCGCCCGACG CCGGCGCGCA CGTCAGCGGA CATCGGCCAG CGGGCGAGAA GTCGTGA
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Protein sequence | MSASSSASAH AGASSLITSL VAAALFMENL DGSIIATALP QMAHSFHVTP VELSVGITSY LLTLAVFIPI SGWIADWAGV RTVFTAALAI FTVASVLCGL TDNLVEFTGA RILQGIGGAM MVPVGRLAVL RATPKEGLMR AVSIITWPGL VAPVLGPPLG GFITTYSSWR WIFYLNVPLG LAGVVLAWRF ISAERDTDRR PFDMLGFVLT GVAGTSVMYA MEAIGRVDSS WRIALVFLAI GLAACAGAWF HLRRCTHPMV DLSAFRIKTF MVAIGGGSLF RIAIGSVPFL LPLMFQVGFG MNPFQSGLLT LGVFAGNLST KLVTTRILRR FGFRSVLLYN GAFAAVTLAS MSLLTASTPY GWILFALFVS GVARSLQFTA INTLGFADVP KQQMSGASTL SSTLGQMTMG MGVAAGAIAL RIAAWWHGHD GQTLAPADFT IAFLVMAALS VIAVVDVISL SPDAGAHVSG HRPAGEKS
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