| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7103 |
|---|
| Symbol | |
|---|
| ID | 6280365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 3494022 |
|---|
| End bp | 3494744 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642618126 |
|---|
| Product | PepSY-associated TM helix domain protein |
|---|
| Protein accession | YP_001890762 |
|---|
| Protein GI | 187921730 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTAC CCGAGGCTAT CGATGTTCAA GCGCCCGCGG GCATCGACCG AACGACGCGC
GAGCCGCAGC GGCTCGACAA CGACGAATTG AAAGCGCGGC AGCAGCGTTC GCGCCGCGCC
ACTTTCGTCA AATGGCTGCG CAAGGTGCAT GGCTGGGTCG GCTTGTGGGG CGCGGCGCTG
GGTTTGCTGT TCGGCACCAC GGGGTTCCTG CTGAACCATC GCGGCGGACC GCTCAAAGTG
TCGACCGGCG AGCCGCAAGT GGCAATGCTG CAGGTGCCGT TGCCGCAACC CGCGCCGGAA
ACGCCGCGTG AGTTGGGCAA ATGGCTCAAG CACGAACTGA AACTGGCGGG CACGCCCGGG
CGCGTGCAGA AAGAGCCGGC TCATCCGGTG GCATGGGGCG AGCGCAGCGT CGTCCAGCCG
GAGCACTGGC AGCTCAATTT CGCGTCGCCG CATGAGAACA CGTCCGCCGA GTACTGGGTG
GGCAACGGCT ATGTGACGGT CAAGCGCAGC GAGAACACGT TTCTCGCGAT GCTGACTAAC
CTGCACAAGG GCGTGGGCCT GAGCGTCGGC TGGGTGCTGC TGATCGATAC GCTCGCGGGC
AGCATCATCT TGCTGTCGCT CACCGGCGTT CTGCTCTGGA CGGAGTTGAA CAAGCGCAAG
ACCATCGGCG CGGTGTTGGT GCTGGGCTCG ATCGTCGCTG CGGTGTGTGT GGGCCTGCTG
TAA
|
|---|
| Protein sequence | MSVPEAIDVQ APAGIDRTTR EPQRLDNDEL KARQQRSRRA TFVKWLRKVH GWVGLWGAAL
GLLFGTTGFL LNHRGGPLKV STGEPQVAML QVPLPQPAPE TPRELGKWLK HELKLAGTPG
RVQKEPAHPV AWGERSVVQP EHWQLNFASP HENTSAEYWV GNGYVTVKRS ENTFLAMLTN
LHKGVGLSVG WVLLIDTLAG SIILLSLTGV LLWTELNKRK TIGAVLVLGS IVAAVCVGLL
|
|---|
| |