| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7090 |
|---|
| Symbol | |
|---|
| ID | 6277931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 3475203 |
|---|
| End bp | 3476123 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618113 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001890749 |
|---|
| Protein GI | 187921717 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGA CGATTTCCCA GCTTCGCGCG TTCACGGCCG TGGCCGAGCA TGGCAGCATC
CGCGCGGCTT CGCGGGCGCT CGGCATCGCG CAGAGCGGCA TCACGCAGCA GTTGCAGAAT
CTCGAATCGA TGCTCGGCGC GACCCTGTTC ATTCGCACGA ACCGCGGCAT TGCGCTGACG
GCCCTTGGCC AGCGGTTGTT GCAGCGCGCG GGCGCGATCA TCGGCGAATG CGAACGCGCG
GAGCAGGAAG TGCAGCAACT GCGCGGCGAC TACGTCGGCG AGGTGACGTT CGGCATGACG
ACCGAACCGT TGATCGATGC CTTTGCACCG GTGCTGATGG AATTTCGCAC GCGCTTCGAG
CGGGTCGCGG TGCATCTGCG CACCGGCACG TCGCGCATGA TGATTTCGTG GATTCGCGAA
GGCACGTTGG ATTTCGCGGT GGCGCTGGTG TCGAAGCACA CGGACACTGC CGATCTCTCG
GTCACGCCGC TGTATCCGTC CGATCCGGTG ATCGTCTGCC GTCAGGGGCA TCCGAAGGCC
GGTGCGACCT CACTGGCCGA ACTCGTCGAT TGCACGTGGG TCGCCACACG CTCGCCGAAT
CTTACGGACG ATCCGCAAAT CAGCCGCCTG AACCATCTGT TCGAAAGCCA TGGCTTGCCG
TCGCCGAAAA TCGTCGCGAC GGTTGAAGGC CTGTACGAAA CGCTGCATCT GGTGAGCGCG
ACGGATTGCC TGTCGCTCGA AGCGTCGATC GTGGTGAAGC GCGGACCGTT TGCGAGCACG
CTCACCGCTA TTCCGGTGCG CGAGCGCGCG GTCGAACAGA ACGTTTGCCT GCTGCAGCGC
GCGGCCATTC CGCTTACGCC CGCCGCGCAG GAACTCGCGA CCATGATCGC TTCGTACACG
CGCACGGTGC GGGCGCGTTG A
|
|---|
| Protein sequence | MALTISQLRA FTAVAEHGSI RAASRALGIA QSGITQQLQN LESMLGATLF IRTNRGIALT
ALGQRLLQRA GAIIGECERA EQEVQQLRGD YVGEVTFGMT TEPLIDAFAP VLMEFRTRFE
RVAVHLRTGT SRMMISWIRE GTLDFAVALV SKHTDTADLS VTPLYPSDPV IVCRQGHPKA
GATSLAELVD CTWVATRSPN LTDDPQISRL NHLFESHGLP SPKIVATVEG LYETLHLVSA
TDCLSLEASI VVKRGPFAST LTAIPVRERA VEQNVCLLQR AAIPLTPAAQ ELATMIASYT
RTVRAR
|
|---|
| |