| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7082 |
|---|
| Symbol | |
|---|
| ID | 6278913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 3465948 |
|---|
| End bp | 3467048 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642618105 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_001890741 |
|---|
| Protein GI | 187921709 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.517819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAT CCACTACCGA CCACAGCTTA CCGCCGTCGC CTGCCGAACC CAGTGATGGC
TGGCTCATTC AAGGCTGCGA GCGCGGCTGG CTGCCGGACA GCGTGATCCG CTTCGGCATG
CGTCAATTGA TGCGTCAGCG TCTGCGCGAC GAAGCGGCCA ATAACGGCGA GTTGCGTGCG
CAACGGCTCA ACCGTCTGCT CGACGATCTG CGTGCGAGTC CCATCGCCAT TGAAACGCAA
GCCGCCAACA CGCAGCATTA CGAGGTGCCG GCGTCGTTCT TCCACGCGCA TCTCGGGCCG
CATCTGAAGT ACTCGTGCTG CCTGTATCCG ACCGGCGGGG AGACGCTCGC GCAAGCCGAA
GCGGCCATGC TCGAACGCTA TGCCGAGCGC GCGGAACTCG CCGACGGTCA GCGGATTCTC
GACCTCGGTT GCGGCTGGGG TTCGCTGTCG TTGTGGCTGG CGGCGCGTTA TCCGAATGCG
CGGATCGTCG CGCTATCGAA CTCGCATGGG CAGCGCGCGT TTATCGAAGC GCGCGCGGCG
CAGGCGGGTC TGCACAACCT CTCGGTGGTG ACGGGCAACA TCGTCGATTT CGAATTCGAC
AATGCGCAGC TTGGCCGCGG CTTCGACCGC GTAGTCTCGA TCGAGATGTT CGAGCATATG
AAAAACTACG GCCTGCTGCT CGCGAAAATC GCGCGCTGGA TGCACGACGA CGCGAAGCTG
TTCGTGCATA TCTTCGTGCA TCGCACGCTG GCATACCACT TCCAGGTGCA GGACGGCAGC
GACTGGATGT CGAAATACTT CTTCACGGGC GGTACGATGC CGTCCGAGGC GCTGCTGCTC
AATTTCCAGG ACGATCTGCG CATGGAGCGG CAGTGGTGGG TGAGCGGCAC GCATTACGAG
CGCACGGCGA ATCATTGGCT CGCCGCGCTC GACGCGGCGC GTGACCGGGT AATGCCGATG
CTCACCGACA CCTACGGCGC GCGCGATGCG GCAGTATGGC TACAACGATG GCGCATGTTC
TATATGGCCG TAGCCGAGCT GTTCGGCTAC GCGCATGGGA ACGAATGGGG CGTCGGGCAT
TACCGGTTCG TCAAGCGCTA G
|
|---|
| Protein sequence | MSVSTTDHSL PPSPAEPSDG WLIQGCERGW LPDSVIRFGM RQLMRQRLRD EAANNGELRA
QRLNRLLDDL RASPIAIETQ AANTQHYEVP ASFFHAHLGP HLKYSCCLYP TGGETLAQAE
AAMLERYAER AELADGQRIL DLGCGWGSLS LWLAARYPNA RIVALSNSHG QRAFIEARAA
QAGLHNLSVV TGNIVDFEFD NAQLGRGFDR VVSIEMFEHM KNYGLLLAKI ARWMHDDAKL
FVHIFVHRTL AYHFQVQDGS DWMSKYFFTG GTMPSEALLL NFQDDLRMER QWWVSGTHYE
RTANHWLAAL DAARDRVMPM LTDTYGARDA AVWLQRWRMF YMAVAELFGY AHGNEWGVGH
YRFVKR
|
|---|
| |