| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7060 |
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| Symbol | |
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| ID | 6278167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3440453 |
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| End bp | 3441220 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642618083 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001890719 |
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| Protein GI | 187921687 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.556367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAACG ACGCGTCCGC AGCGCTCAAC GGCCGGCGCG TCCTCGTGAC GGGCGGCGCG
CGCGGTCTCG GCGCGGCATT CGTCCGCTCG CTGGTGCAAG CCGGTGCGCA AGTCGTGTTC
GGCGACGTGC TGCACGAAGA AGGCCGCGCG CTCGCGGCAT CGCTCGTCGA GCAAGGACAC
GCAGTCACCT ACGTGCCGCT CGATCTCGCC GACCCCACCA GCATCAAGCA ATTCGCGGAG
CAAGGCGCGG CGCAACTCGG CGGTCTCGAC GCATTGATCA ACAACGCGGC CATCACCAAC
TCCGGCGGCA AGTTCGCCGA CGAGTTGTCT GTCGACACGT GGGACGCCGT GATGAACGTC
AACGTGCGCG GCACCTGGTT AATGAGCACC GCCGCGCTGC CGTATCTGCG CGACTCGGGC
CGCGGCAGCA TCGTCAACAT TGCCTCGGAC ACGGCGATGT GGGGCGCGCC GAAGCTGCTG
GCTTATGTCG CTAGCAAAGG CGCCGTGATT TCGATGACCC GGTCGCTGGC GCGCGAATTC
GGCGCGCATC AGGTGACGGT GAACGCGATC GCGCCGGGGC TGACCGAAGT CGAGGCGACC
GCCTATGTGC CCGCCGAGCG CCACGAGTAT TACCTGCAAG GCCGCGCGCT CACGCGCGCA
CAAGTGCCCG ACGACGTCAC CGGGCCCGTA CTGTTCCTGT TATCCGATGC CGCTCGCTTC
GTGACCGGCC AACTGCTGCC GGTCAACGGC GGCTTCGTGA TGAATTGA
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| Protein sequence | MHNDASAALN GRRVLVTGGA RGLGAAFVRS LVQAGAQVVF GDVLHEEGRA LAASLVEQGH
AVTYVPLDLA DPTSIKQFAE QGAAQLGGLD ALINNAAITN SGGKFADELS VDTWDAVMNV
NVRGTWLMST AALPYLRDSG RGSIVNIASD TAMWGAPKLL AYVASKGAVI SMTRSLAREF
GAHQVTVNAI APGLTEVEAT AYVPAERHEY YLQGRALTRA QVPDDVTGPV LFLLSDAARF
VTGQLLPVNG GFVMN
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