Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7031 |
Symbol | |
ID | 6279216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3411994 |
End bp | 3412473 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642618054 |
Product | thioesterase superfamily protein |
Protein accession | YP_001890690 |
Protein GI | 187921658 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0529505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00000000906305 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTTTC ACACCAGAAA GTGGGTCAAG CCCGAAGACC TGAACCCGAA CGGCACGTTG TTCGGCGGCA GCCTCCTGCG CTGGATCGAC GAAGAAGCCG CGATCTACGC CATCTGCCAG TTGGACAATC AGCGCGTCGT GACCAAGTTC ATGTCCGAGA TCAATTTCGT CAGTTCGGCG CGGCAGGGCG ACATCATCGA ACTCGGGATG ACGGCCACGC ATTTCGGCCG CACGTCGATC ACGCTGCGCT GCGAAGTGCG CAACAAGATC ACGCGCAAGA GCATCCTGAC CGTCGAGAAG ATGGTGTTCG TCAATCTCGA CGAGAACGGC GAGCCGGCGC CTCACGGGCG CACGCAGATC CGTTATGCGG ATGAAGCGTT TGCCCGCTAT CGCGAAAATT CGCGGCCGGT GCCGCAAGGC GCGGTTGCCG TTGAAGAAGA GCGGGTTGCG TCGCGTGCCG AGGTAGATAG CCTGCATTGA
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Protein sequence | MNFHTRKWVK PEDLNPNGTL FGGSLLRWID EEAAIYAICQ LDNQRVVTKF MSEINFVSSA RQGDIIELGM TATHFGRTSI TLRCEVRNKI TRKSILTVEK MVFVNLDENG EPAPHGRTQI RYADEAFARY RENSRPVPQG AVAVEEERVA SRAEVDSLH
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