| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7013 |
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| Symbol | |
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| ID | 6277466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3393490 |
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| End bp | 3394476 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642618036 |
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| Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
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| Protein accession | YP_001890672 |
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| Protein GI | 187921640 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.377045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00497877 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCACGTC ATCCGCTGCT CGCGCGCCGC GCATTCATTG CCGGCGTGGG CGCAACGCTC
GCCGCCGCCA CGCTGCCTGT CATTTCCACG TCCGCTTTTG CCGCCGAGGC GCACGCCAAG
GAATTCCGCA TCGGTTATCA GAAAGCCGCC AATACGCTCG TGTTGCTCAA GGCGCACGGT
ACGCTCGAAA AACGGCTCGC GCCGCTCGGC GTCACCGTCA AATGGACTGA GTTTGCTGCC
GGACCGCAGT TGCTGGAAGG ACTGAATGTC GGCGCCATCG ACTTCGGCTA TGTCGGCGAG
GCGCCGCCCG TGTTCGCGCA GGCCGCCGGC GCAAACTTCG TCTACGTCGC CTATGAGGTC
CCGACGCCGC ATGCCGAAGG CATCCTCGTG CATCGGGATG CGCCGATCAA AACGCTGGCC
GATCTGAAGG GCAAGAAAAT CGCCTTGAAC AAAGGTTCGG ATGTTCACTG GTTTCTGGTC
GCCGCGCTAC AGAAAGCCGG CGTGAAGTAC AGCGAGATTC AGCCGGTTTA TCTGGCGCCA
GCGGATGCGC GCGCGGCTTT CGAACGCGGT GCGATCGACG CATGGGCGAT CTGGGATCCG
TTCCTCGAAG CGGCAAAGCG GCAGTCGAAC GCGCGCTTGC TCACGGACGC CGACGGCATT
GTGAGCCATC ACCAGTTCTT CCTGAGCGCG CGGTCGTTCG CGGAACAGAA CGCCAATGTG
CTCGACATCA CGATGGACGA AGTGGGCAAA GAGGGCGCAT GGGTTCGCGG ACATTACAGC
GAGGCCGCCG CGCAACTCGC ACCGATTCAG GGGCTCGACG CGGGCGTGAT CGAAGCGGGG
TTGCGGCACT ACGCGCACGT GTACAAACCC GTCGATGCGA ATGTGCTTGC GGAACAGCAG
CGTATCGCCG ATGCCTTCAG CGAATTGCGC ATCATTCCGA CGAAGATCGT CACCAAAGAT
GCGGCGTTGC CGGGTAGAAA AGTTTAG
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| Protein sequence | MSRHPLLARR AFIAGVGATL AAATLPVIST SAFAAEAHAK EFRIGYQKAA NTLVLLKAHG
TLEKRLAPLG VTVKWTEFAA GPQLLEGLNV GAIDFGYVGE APPVFAQAAG ANFVYVAYEV
PTPHAEGILV HRDAPIKTLA DLKGKKIALN KGSDVHWFLV AALQKAGVKY SEIQPVYLAP
ADARAAFERG AIDAWAIWDP FLEAAKRQSN ARLLTDADGI VSHHQFFLSA RSFAEQNANV
LDITMDEVGK EGAWVRGHYS EAAAQLAPIQ GLDAGVIEAG LRHYAHVYKP VDANVLAEQQ
RIADAFSELR IIPTKIVTKD AALPGRKV
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