Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6972 |
Symbol | |
ID | 6278989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3348459 |
End bp | 3349061 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642617996 |
Product | hypothetical protein |
Protein accession | YP_001890632 |
Protein GI | 187921600 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000112852 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACC GTCAACATCC TCGTTCGCAC ATGCTCCGCT CGGTCCTTCT GGCTTCAGCC TTCGCTAGTC CCATGTGCGC TCAGGCGCAA GACAGCTTGT CGGCAAGCGA GCCACAAGCG GTCGGCGCTG CCGCGCTCGT TGAAGCGACC GCGCGCGTCG TTCATATCGA TACGCAAAAC CATGCTGTCA CGCTTCGGGG GCCGCGAGGA AATACCAACG TTGTCAAAGT CGACCCGGCG ATCGGCGACG TGAGCAAACT CAAAATTGGC GATGAGGTTC ACATCGCCTA TGAAGGCGAG TTGCTGTTGT CGGCGGACAA GGTGGATACC AAGGGCATTC GTGCGCGCGT CGAAGATCGG GCGACGAGCC CTGCGTCGGG CGGTGTATCG GTGCAGTTGC GACGCGTCGA AATCATCGCC ACGGTCCAGA ATATCGATCG AAAAAAGCGG CAGGTGACGC TTCGTGGACC TTCCCGCACG GTGACGTTAC AGGCGTCGCC AGACGTGCAA TTGGAAAAAT TCAAAGTGGG CGACAGCATC CGTGCCGACT ATGCATCCGC GAAGGCCGTG CAGATCACGC GAAACGGTCA GGCCATTCAA TAG
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Protein sequence | MKNRQHPRSH MLRSVLLASA FASPMCAQAQ DSLSASEPQA VGAAALVEAT ARVVHIDTQN HAVTLRGPRG NTNVVKVDPA IGDVSKLKIG DEVHIAYEGE LLLSADKVDT KGIRARVEDR ATSPASGGVS VQLRRVEIIA TVQNIDRKKR QVTLRGPSRT VTLQASPDVQ LEKFKVGDSI RADYASAKAV QITRNGQAIQ
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