| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6954 |
|---|
| Symbol | |
|---|
| ID | 6280243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 3328020 |
|---|
| End bp | 3328919 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642617978 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_001890614 |
|---|
| Protein GI | 187921582 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.850807 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTGT TCCTCTATGC CGTCACCGTT CTGATTTGGG GCACCACGTG GATCGCGATC
AAATGGCAAC TGGGAGCGGT GCCGCCGCCG GTATCCATTG CCTGGCGTTT CTGGATCGCG
GCGCTGGTGC TGTTCGCGCT GCTGCGCATC ATGCGCCGGC CGATCTGGCC GCCGCGTGCA
GCATGGCGTT TCCTGATCGC ACAAGGATTG GCGCTCTTCT GTCTAAACTT TTTGTGCTTC
TACTACGCTG AACAGGTGGT GCCGAGCGGC CTGGTGGCGG TAGTGTTTTC TACCGCGCCG
CTGCTGAATT CGATCAACGG TCGCCTGTTC ATGGGCCGGC CGTTGCAACC TACGGCGATT
GCGGGGGCCG CGTTGGGACT CGTCGGCATC GTATGTCTGT TCGTTCAGCA GATGACGGGG
CATCTCGGCG ATCACGCCGC GTGGTTCGGT CTCGGCATCG CGTTCCTCGG AACCTTGTGC
TTCTCGGCCG GCAACCTGTT GTCGAGCCGC ATGCAGGCGA TGGGCTTGCA CCCGTTCGCC
ACGAATAGCT GGGCGATGCT GATCGGCGCC AGCGTCCTGA CTATGGGCAG CGTATTGGCC
GGCTTTTCGT TTGCCGTCGA GCCGTCCGCG CGCTATCTCG GCGCGCTCGC CTATCTCGCG
ATATTCGGCT CGGTGGTTGG CTTCACGGCG TACCTGATGC TGGTCGGGCG CATCGGACCG
GAACGCGCCG CTTACAGCAC GGTCTTGTTT CCGATCGTGG CGCTCGCGGT GTCGACGGTA
TTCGAAGGCT ATCGGTGGTC CGCGCTGGCC GTCGTCGGTC TGTTGCTGGT GGTGGCCGGC
AATCTGGTGG CGTTCGATCT CACGCGACGT ATTTTTGTGC GTCGGGTGCG GACTTCGTGA
|
|---|
| Protein sequence | MNLFLYAVTV LIWGTTWIAI KWQLGAVPPP VSIAWRFWIA ALVLFALLRI MRRPIWPPRA
AWRFLIAQGL ALFCLNFLCF YYAEQVVPSG LVAVVFSTAP LLNSINGRLF MGRPLQPTAI
AGAALGLVGI VCLFVQQMTG HLGDHAAWFG LGIAFLGTLC FSAGNLLSSR MQAMGLHPFA
TNSWAMLIGA SVLTMGSVLA GFSFAVEPSA RYLGALAYLA IFGSVVGFTA YLMLVGRIGP
ERAAYSTVLF PIVALAVSTV FEGYRWSALA VVGLLLVVAG NLVAFDLTRR IFVRRVRTS
|
|---|
| |