| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6930 |
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| Symbol | |
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| ID | 6278489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3300173 |
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| End bp | 3301555 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642617957 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001890593 |
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| Protein GI | 187921561 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.11506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAATC AGGATATGCA GGTGGCCGCT CTCGGCCTTG CCCCCACTTT GCCGGCGGCA
GCGGCATCCG CGCACGGCCC CATTCCTCTC GACGACGTTC CCCTGAACGC CTTTCACGTC
AAGATCGCCG GGTTGACGTT CGGCGCGCAC TTTACTGAAG GTTTCGCGCT CGGCACGATC
GGCTATGCGC TCGCGTCGCT GAATCGTCAA ATGCCGCTCG ACGCGTTCTG GATGGGCATG
ATCGGCAGTT CCGCATTGAT GGGCATTTTT ATCGGCAGCC TGGTTTTCGG CTGGCTGTCG
GATCGCATGG GACGTCAGAA GATTTTCCTG CTGAGTTTTA TCATCATCAC CGCGGCTGCG
TTCGCGCAGT TCTACGTGCG TTCACCCCTT GAATTGTGTT TGCTGCGGGT GTTGATCGGC
TTCGGCATGG GCGGCGACTT CGCGGTGGGC CATGCGATTC TCGCGGAGTT CTCGCCGCGC
AAACATCGCG GCACGTTGCT CGGCTCGTTC AGCGTGGTGT GGACGATCGG CTACGTGGTG
GCGAATGTGC TCGGCATGCA GTACGCCGAT GCCTCGCCGG ATGCTTGGCG CTGGCTGCTG
GCGTCGGCGG GTGTGCCGGC GTTGATCGTT CTCGTGCTGC GCATGGGTAC GCCGGAGTCG
CCGCGCTGGC TGCATGGCAA AGGCCGCACA GCGGAGGCGA AATCAATCGT GCTGAAGCAT
TTCGGTGCGA ACGTCACACT CGACGGCGGC CACGACGATC ACGCGCAATC GGCGGGCGGC
TTCATGCGTC TGTTCAAGGC GGACCTGATT CGCCGCACGA TTTTCAATTG CGCGTTCTTC
GTGTGTCTCG TCATTCCGTA CTTCGCCGTT TATACGTTTC TGCCGACCAT TCTGAAAGCG
ATCCACTTGA ACAATGACTC GAGCGCGGAC TTTCTGCTGA ACGGATTTCT CGTGCTCGGC
GCGTTGATCG GCATCTGGCT GACGATCAAA CTTGCGCGGC GCACATTTCT GATCGGCTCG
TTCGCGGTGA CGTGCGTGTC GCTGATCGCG CTGAGTGTGC TGCCGGAATC GGCGACGCTC
GGCATGATCG TCGCGTTCGG GATTTTCACG CTGACCATGT CGGCGTTCTC GAATCTCGTC
GGCGTGTTTC CGCCGGAGTG TTTTCCCACC GAGGTGCGCG CGTGTGGTGT CGGACTCGCG
ATTGCATGCA GCCGGCTTGG ATCGGCCGTC GGCACGTTTC TGCTGCCGCT CGGCATCGTG
CATTTAGGCT TCCATATCAC GATGATGGTG CTCGCGGCGG TGCTGCTGAT CGGCATGCTG
GTGTCGATCG CCTGGGCGCC GGAAACGAAG CATTTGACTT TGAACGAAGC TAGCGGCGCG
TAA
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| Protein sequence | MSNQDMQVAA LGLAPTLPAA AASAHGPIPL DDVPLNAFHV KIAGLTFGAH FTEGFALGTI
GYALASLNRQ MPLDAFWMGM IGSSALMGIF IGSLVFGWLS DRMGRQKIFL LSFIIITAAA
FAQFYVRSPL ELCLLRVLIG FGMGGDFAVG HAILAEFSPR KHRGTLLGSF SVVWTIGYVV
ANVLGMQYAD ASPDAWRWLL ASAGVPALIV LVLRMGTPES PRWLHGKGRT AEAKSIVLKH
FGANVTLDGG HDDHAQSAGG FMRLFKADLI RRTIFNCAFF VCLVIPYFAV YTFLPTILKA
IHLNNDSSAD FLLNGFLVLG ALIGIWLTIK LARRTFLIGS FAVTCVSLIA LSVLPESATL
GMIVAFGIFT LTMSAFSNLV GVFPPECFPT EVRACGVGLA IACSRLGSAV GTFLLPLGIV
HLGFHITMMV LAAVLLIGML VSIAWAPETK HLTLNEASGA
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