| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6891 |
|---|
| Symbol | |
|---|
| ID | 6279603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 3255126 |
|---|
| End bp | 3256544 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642617918 |
|---|
| Product | protein of unknown function DUF1214 |
|---|
| Protein accession | YP_001890554 |
|---|
| Protein GI | 187921522 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5361] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0179873 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.195601 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA ATCGCCGAGC ATTGTTTTCG ATTCACTGGA CCTGCGCGTC GTTCGCGGGC
CTCGCATTTC TGGCCGGTTG CGCGTCGACC CCCACCGCGA CACAAAAATC CACGGGGTGG
ATCAAGGACG AGGTGGCCGA CTCGTACGTA TTCGGCTACC CGCTCGTGCT GATGGGCGTC
GCGCGCGATG CGGCGGTCGG CACCAATCCA GGCCAGGCGC CCCTCAATAC GCTGCGCCAC
GCCCAGGCAT TGCCGCCGAT CGGCGCGTCC AATCCGATGC AGCCGAGTCT CGATACGTTC
GATTCGACCG GCTGGCTGGA CGTCGGCAGC GAACCGGTGA TCGTTTCGCT GCCCGATTCG
CACGGCCGCT ATGTCGACGC CCGCGTGCTC GACATGTGGA CCAACGTGGT GTGGTCGACC
AGTTCGCAGT TCGACACGCG CGCGGCCGGC ATCAAGGCGC AGGCGATCGC CTTTGTCGGT
CCGGGTTGGC AGGGCGATTT GCCCAAGGGT GTGAAGCGCG TCGACGTGCC GACACGCAAC
GCGTGGGTGA GCGTGCGTAT CCAGTTGAAC GGCACGCGCG ATCTGACGGC AGTCCGTAAG
CTGCAGCGCG CCATTCGCGT CGCGCCGCTC AGTGTCTATG CGGGCGACGG CCGCTCCGCC
TCGATCACGC CGCCGCGCAG CAATGCCGCC GACGCCGCGG CGGGCGCTGC CGGCACGCCG
GCCGCGCAGG TCGCGGCGCT CGACGCGAAC GGCTTCTTCA CGCGACTCGC GCAGGCCTTG
CCCGACAATC CGCCGACGCC GGCCGATCCG CATGCGCTCA AATTCCTATC GGACCTCGGT
GTGACGCCCG GCGAGCCGGT CAAGCTGCCG AAAGCGCCGG ACGCCATCGC GGCCGGTCTC
GCCGACGGTC ACGAACGCGT CGTCACGCCG CCGTCGAATT TGCTGAGCGG CAACGGCTGG
AACTGGTTCG GCGACGGCGT GGGCAACTAC GGCCCCGACT ACGCGATGCG CGCCTACGCC
GCTTATGCGC AACCGGGCAT CGGCACGAAA GACGACGAAG TTCGCGCGGT CGTTACTCAG
GACAGCGACG GTCGCGCGCT CAATGGCGCG AACCGCTACG TGATCCACTT CGCGCCGAAT
CAGTTGCCGC CGGTGCGCGG CTTCTGGTCG ATCACCGCTT ACACGAAGGA CGGCGCACTC
GGCGAAAGCG CGCCGGCGCG TCTCGCGGTC GGCGATCGCA ATGGCGCGCG CCGCAATCGC
GACGGCACGC TCGACGTGAC GGTGTCGTCC ACCCGGAGCA GGAGCGGCAA CTGGCTGCCG
GCGCCGCGTG CCGATCTGCA ACTCGTGCTG CGTCTGTACG CGCCCAAGCC GCAAGCGACC
GACGGCAGTT GGCAACCGCC GGCCGTCGTG CGTCAGTGA
|
|---|
| Protein sequence | MIKNRRALFS IHWTCASFAG LAFLAGCAST PTATQKSTGW IKDEVADSYV FGYPLVLMGV
ARDAAVGTNP GQAPLNTLRH AQALPPIGAS NPMQPSLDTF DSTGWLDVGS EPVIVSLPDS
HGRYVDARVL DMWTNVVWST SSQFDTRAAG IKAQAIAFVG PGWQGDLPKG VKRVDVPTRN
AWVSVRIQLN GTRDLTAVRK LQRAIRVAPL SVYAGDGRSA SITPPRSNAA DAAAGAAGTP
AAQVAALDAN GFFTRLAQAL PDNPPTPADP HALKFLSDLG VTPGEPVKLP KAPDAIAAGL
ADGHERVVTP PSNLLSGNGW NWFGDGVGNY GPDYAMRAYA AYAQPGIGTK DDEVRAVVTQ
DSDGRALNGA NRYVIHFAPN QLPPVRGFWS ITAYTKDGAL GESAPARLAV GDRNGARRNR
DGTLDVTVSS TRSRSGNWLP APRADLQLVL RLYAPKPQAT DGSWQPPAVV RQ
|
|---|
| |