Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6866 |
Symbol | |
ID | 6279466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3219035 |
End bp | 3219643 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642617893 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_001890529 |
Protein GI | 187921497 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.140006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.169631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAG TTGTGATTAT TGATGATCAT CCAATCATTC GAGGGACAAT AGCCAGCGTG TTGCGCGCTG ATCCCGAACT GGAGCTGGTT GGAGAATCGG GCGACGGCGA AGACGGTCTG GCAATGGTGC TGACAAAACA CCCGGACTTG GTCATTATTG ATCTCGATTT GCCACGGCTC GACGGCCTCA CAATGATCCG CCGCATTCGA GCAAATAGTA TAAAAATATC TATTCTTGTG CTCTCTGCCA AGCCTGAGCA CATTATGGCC GGTTATGCGC GTAACGCGGG CGCAAATGGT TATGTCAGCA AGGGCCGGGA AATCAGCGAA TTGGTCACAG CATTAAAAAC GGTTTTATTC GGCTACGACT GCTTCCCGGC CGATAATGGT GACGTTGCGC CCGCGAGTGG CCTGAGCACT TTGTCGGCGC GTGAGGTGGA GGTTTTGCAA CATCTCGCAC GCGGCGTGAG CAATCGCGAC ATTGCCGGTC GATTGTCCCT CAGCGACAAA ACTGTCAGTA CATACAAGAG CCGTATCCAG GAGAAACTCG GCCTCACATC GTTGGCAGGA CTCATCGAGT TCGCGACTTT GCACCGGCTG GTCGAATAA
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Protein sequence | MKRVVIIDDH PIIRGTIASV LRADPELELV GESGDGEDGL AMVLTKHPDL VIIDLDLPRL DGLTMIRRIR ANSIKISILV LSAKPEHIMA GYARNAGANG YVSKGREISE LVTALKTVLF GYDCFPADNG DVAPASGLST LSAREVEVLQ HLARGVSNRD IAGRLSLSDK TVSTYKSRIQ EKLGLTSLAG LIEFATLHRL VE
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