| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6844 |
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| Symbol | truA |
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| ID | 6279694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3193442 |
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| End bp | 3194254 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617871 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001890507 |
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| Protein GI | 187921475 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000523123 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.307747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGTA TTGCTCTAGG CGTCCAGTAC GACGGTTCGG CATTCTGCGG CTGGCAGTCG
CAACCGCACC GCAACACCGT GCAGGACGAA CTCGAACGGG CGCTCCGCGA GTTTGCGCGG
ACGCCGGTGC AAACCGTCGT CGCGGGGCGT ACGGATACGG GTGTGCATGG CCTTGGGCAG
GTTGTGCACT TCGACACTGA GCTGGATCGT GCAGACGTTT CGTGGGTTCG CGGCACCAAT
TCGTTCCTGC CGAAGACGAT CTCGGTGCAG TGGGCCAAGC CGATGCCCGA CGAGTTCCAC
GCGCGTTTCT CGGCGTTCGA GCGGACCTAT TACTACGTGC TGTACGTCCA TCCAGTGCGC
TCGCCGATGC TGGCGACTCG GGCCGGCTGG GTGCATACAT CGCTCGACGT CGACGCGATG
CAGAAGGCCG CCGCGCATCT GCTCGGCGAA CACGACTTTT CGGCGTTCCG TTCGTCGCAA
TGCCAGGCGA AAACGCCGGT CAAGCACCTG TATCAGATCG ACGTGAAGCA ACAGGGCGAC
TTCGTCCATT TCCGTTTTCG GGCGAACGCG TTCCTGCACC ACATGGTGCG CAACCTGATG
GGCTGCCTGG TGTACATCGG CGGCGGCCGC CGCCCGGTCG AATGGATGGC CGAGGTGCTC
GCGAGCCGCG ATCGCGATTT CGCCGCGCCG ACCTTCATGC CGGACGGTTT GTATCTGGCG
CAGGTGGGCT ATCCTGAGCA ATTCGCCGTG CCCGCGCCGC AAACGGGCAG CGTGCCGTGG
AATACCGTAT GGACCGAGCA AGCGCAAACA TGA
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| Protein sequence | MKRIALGVQY DGSAFCGWQS QPHRNTVQDE LERALREFAR TPVQTVVAGR TDTGVHGLGQ
VVHFDTELDR ADVSWVRGTN SFLPKTISVQ WAKPMPDEFH ARFSAFERTY YYVLYVHPVR
SPMLATRAGW VHTSLDVDAM QKAAAHLLGE HDFSAFRSSQ CQAKTPVKHL YQIDVKQQGD
FVHFRFRANA FLHHMVRNLM GCLVYIGGGR RPVEWMAEVL ASRDRDFAAP TFMPDGLYLA
QVGYPEQFAV PAPQTGSVPW NTVWTEQAQT
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