Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6823 |
Symbol | |
ID | 6277901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3165813 |
End bp | 3168023 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642617851 |
Product | glycogen branching enzyme |
Protein accession | YP_001890487 |
Protein GI | 187921455 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.851597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGC ATGATCCGGC CGTAGGCCTC CAACCGCTAG ATATCGACGC GCTCGTTGAA GCGCGCCACC CCGATCCTTT CTCGCAACTC GGGATGCATC AGACGGACGC AGGTCCAGTG GTGCGCGCTC TGTTGCCGAA CGCCGCGCAC GTCAGCGTGA TTGCGCGCGC CGACGGTGCG CTGCTAGGCG AACTCGAACA ATTGCGGCCG GGGCTGTTTG CCGGCCGCGT CACGACTGCG GCGCCGTACC GTTTGCGGAT CGACTGGCAT GGCGTGGTGC AGGAAATCGA GGACACCTAT TCGTTCGGCC CGGTTCTCGG CGACGAGCCG CTTGGCCGGC TCGCCGGTGG CGATCCGTAT GCGGTGCTCG AATGCCTCGG CGCGCATCCG ATGGAATTTG AGGGCGTGCC GGGTGTGCGC TTCGCCGTGT GGGCGCCGAA CGCACGGCGC GTTTCGGTGG TAGGCGACTT CAACGCGTGG GACGGCCGCC GTCATCCGAT GCGGCTGCGC CATCAGGCCG GCGTGTGGGA ATTGTTCGTG CCGCGCGTCG GGCCGGGCAC GCGCTACAAA TACGAGCTGC TGTCGCGCGA TGGTCATCCG CTGCCGTTGA AAGCCGATCC GTGCGCGATG CAGACGGAGA AGCCGCCAGG CACTGCGTCG ATCGTGGCGC ATGTCGACGA GATCGAACAG TTTCCGTGGA CCGATCACGA ATGGATCCAG TCGCGCGCCA GCAAGCAGAC GCCGCGCTCG CCGATCTCGA TCTACGAAGC GCATGCGGAA TCCTGGCTGC GCGTCGCGGA ACAAGGTCAG CGCGGACTCG ATTGGGATGA ACTCGCGGAG CGGATGATTC CGTACGTGAA AAGCATGGGC TTCACGCACG TGGAGTTCAT GCCGATTGCC GAGCACCCGT TCGGCGGATC GTGGGGTTAT CAGCCGCTCG GGCAGTTTGC GCCATCGGCG CGCTTCGGCA AGCCCGAACA GTTCGCGAGA TTCGTCGATA AGGCGCACGA AGCCGGACTC GGCGTGATTC TCGATTGGGT GCCCGCGCAC TTTCCGAACG ACGCGCACGG CCTGATCGAC TTTGACGGCA CGCCGCTCTA CGAGCACGCC GACCCGCGCG AAGGCTATCA CCAGGACTGG AACACGATGA TCTACAACCT CGGCCGCAAC GAGGTGAGCG CGTTCCTGGT CGCTTCGGGG CTGGCGTGGC TGAAGCGCTA TCACGTCGAC GGTCTGCGCG TGGACGCGGT CGCCTCGATG CTGTATCGCG ACTATTCGCG CGCGGCCGGC GAGTGGGTGC CGAATATTTA CGGCGGCCGC GAGAACCTCG AATCGATCGC ATTCCTCAAG CGCCTGAATC ATGAAGTCGG CTACGTGCCG GGCGCACCGG GCGCGATCAC GATCGCCGAG GAATCGACCG CATGGCCGGG CGTGACGGCG CGCGTGGAAG ACGGCGGGCT CGGTTTCCAG TTCAAGTGGA ACATGGGCTG GATGCACGAC ACGCTGCACT ACATGGAAGA AGATCCGGTC TACCGTCAAT ACCATCACCA CAACATGACG TTCGGGATGG TGTACGCGTA TTCGGAGCGC TTCGTGCTGC CGCTTTCGCA CGACGAAGTG GTGCACGGCA AGGGCTCGCT GCTCGGCAAG ATGCCCGGCG ACAGGTGGCA GAAGTTCGCC AACCTGCGCG CGTACTTCGG TTTCATGTGG ACGCATCCGG GCAAGAAGCT GCTGTTCATG GGCGGCGAAT TCGGCCAGAT GGCGGAATTC GATCACGATA CGTCGCCGCA TTGGCATCTG CTCGACGATT CGAACCATCA CGGCGTGCAA AAGCTGGTGC GCGACCTGAA CCGGCTGTAC AGCGAGGAGC CCGCGCTGCA TCTGCTCGAT TGCGAGCCAG GCGGCTTCGA ATGGCTGATC GGCGACGACA GCGGCAACAG CGTATTCGCC TATCGGCGCA CCGACGGCGC GGGCCGCGAA GTGGTCGTGG TCTGCAATAT GACGCCGGTG CCGCGAGTCG GTTACCGGAT CGGCATGCCG CGCGGCGGAC GCTGGTCGGA AGTGCTCAAT ACGGACGCCG GCGTGTACGG CGGCTCGAAC ATGGGCAACG GCGGCCTGAT TCATACCGAC GAGCAATCGA GCCACGGCTG GCCGAATTCC GCTTCGCTCA CGCTGCCGCC GCTTGCGACG ATCGTATTGC GCGCGGAGTA A
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Protein sequence | MSEHDPAVGL QPLDIDALVE ARHPDPFSQL GMHQTDAGPV VRALLPNAAH VSVIARADGA LLGELEQLRP GLFAGRVTTA APYRLRIDWH GVVQEIEDTY SFGPVLGDEP LGRLAGGDPY AVLECLGAHP MEFEGVPGVR FAVWAPNARR VSVVGDFNAW DGRRHPMRLR HQAGVWELFV PRVGPGTRYK YELLSRDGHP LPLKADPCAM QTEKPPGTAS IVAHVDEIEQ FPWTDHEWIQ SRASKQTPRS PISIYEAHAE SWLRVAEQGQ RGLDWDELAE RMIPYVKSMG FTHVEFMPIA EHPFGGSWGY QPLGQFAPSA RFGKPEQFAR FVDKAHEAGL GVILDWVPAH FPNDAHGLID FDGTPLYEHA DPREGYHQDW NTMIYNLGRN EVSAFLVASG LAWLKRYHVD GLRVDAVASM LYRDYSRAAG EWVPNIYGGR ENLESIAFLK RLNHEVGYVP GAPGAITIAE ESTAWPGVTA RVEDGGLGFQ FKWNMGWMHD TLHYMEEDPV YRQYHHHNMT FGMVYAYSER FVLPLSHDEV VHGKGSLLGK MPGDRWQKFA NLRAYFGFMW THPGKKLLFM GGEFGQMAEF DHDTSPHWHL LDDSNHHGVQ KLVRDLNRLY SEEPALHLLD CEPGGFEWLI GDDSGNSVFA YRRTDGAGRE VVVVCNMTPV PRVGYRIGMP RGGRWSEVLN TDAGVYGGSN MGNGGLIHTD EQSSHGWPNS ASLTLPPLAT IVLRAE
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