| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6799 |
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| Symbol | |
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| ID | 6279864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3136346 |
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| End bp | 3137845 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642617828 |
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| Product | Deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_001890464 |
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| Protein GI | 187921432 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000114492 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000000135491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACACGCG TCCGACGCTT GAACGACTCT TTCGACACCG GTCTGGTCTG GTTTCGCCGT
GACCTGCGCA GCACGGACAA CGCCGCGCTC TACTACGCGC TCAAGCATTG CGAGCGCGTG
TGGTGCGTAT TCGTGTTCGA CACGACGATC CTGCAACCGC TAGTCGAAGC CTGGCAGGCT
CGCCATCCCG ATACGCAGCC GCAGGATCGC CGCATCGAGT TGATTCTTGG GGCGCTGGGC
GAACTGGATG AAGCATTACG CGCCAATGGC GGCGGCCTGA TCGTGCTGTA CGGCGACCCC
GCCGACCTGG TGCCGAAGCT CGCCGATGAA CTCGGCGTGG ACGCGGTTTT CGCGAATCAC
GACTACGAAC CGGTCGCCAT CGCGCGCGAC GAGACAGTCC GCGAGACGCT CGCGGAAGCC
GGGCGCCAGT GGCTAACGTT CAAGGATCAG GTGATTTTCG AGCGGGACGA GGTGCTCACC
GGTCAGAACA AGCCGTTCAC GGTGTTCACG CCGTACAAGA ACGCCTGGCT CAAGCAACTG
ACGGCCTTCG ATCTGAAGCC ATACCCGGTG GAAAGTTACA CGAAGCATCT GGCCGCGCCG
CCGTCGAAGC TGGACCGCCG TTTACCCACG CTCGATCAAC TCGGCTTCGC GCCGAGCAAT
CTCGCCGAAC TGGACCTGCC CGCCGGCATG AGCGGCGCGC AGCGTCTGCT CGACGACTTC
GCGACGCGCA TCGACAGCTA CAAAGACCGG CGCGACTTTC CCGCCGCGAA GGGTCCGAGC
TATCTGTCGA TCCATCTGCG CTTCGGCACG GTCTCGATCC GCACGCTCGC GCGCCTCGCC
CACGAGATGT CGCTGCAACC CGACGGGGAA GGCTCGACGA CCTGGCTGTC GGAACTGATC
TGGCGAGACT TCTACTTCAT GATCCTCGCG CATCATCCGC GGCTCGCGAA CGGCGCGTCG
TTCAAGGAAG AGTACGACCA GCTGCGCTGG GAGCAAGGCC CGGAAGCCGA CGAGGCGTTT
GCCGCGTGGT GCGACGGCCG CACCGGCTAC CCGCTCGTCG ACGCGGCGAT GCTGCAACTG
AACCGCACCG GCTATATGCA CAACCGTCTG CGGATGGTGA CAGCGAGTTT TCTGGTGAAG
GATCTGGGCG TGGACTGGCG ACTCGGCGAG CGGTACTTCG CCCAACAGTT GAACGACTTC
GATTTCTCGG CGAACAACGG CGGCTGGCAA TGGGCGGCAT CGACGGGATG CGACGCGCAG
CCTTACTTCC GGATCTTCAA TCCGATCACG CAGTCCGAAA AATTCGACGC CGAGGGTCGC
TTTATCAAGC GTTATTTGCC CCAGCTCGCG AGGTTGCCGT CGAAGTGGAT TCACGCGCCG
TGGCTGGCGG GCACGGAGCG GCTCGCGGAA TTCGGCGTGG TATTGGGCAA AGACTATCCG
GCGCCGATCG TCGACCATGC CGAAGCGAGG GCGCGCACGC TGGCCCGATT CGGCAAGTGA
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| Protein sequence | MTRVRRLNDS FDTGLVWFRR DLRSTDNAAL YYALKHCERV WCVFVFDTTI LQPLVEAWQA
RHPDTQPQDR RIELILGALG ELDEALRANG GGLIVLYGDP ADLVPKLADE LGVDAVFANH
DYEPVAIARD ETVRETLAEA GRQWLTFKDQ VIFERDEVLT GQNKPFTVFT PYKNAWLKQL
TAFDLKPYPV ESYTKHLAAP PSKLDRRLPT LDQLGFAPSN LAELDLPAGM SGAQRLLDDF
ATRIDSYKDR RDFPAAKGPS YLSIHLRFGT VSIRTLARLA HEMSLQPDGE GSTTWLSELI
WRDFYFMILA HHPRLANGAS FKEEYDQLRW EQGPEADEAF AAWCDGRTGY PLVDAAMLQL
NRTGYMHNRL RMVTASFLVK DLGVDWRLGE RYFAQQLNDF DFSANNGGWQ WAASTGCDAQ
PYFRIFNPIT QSEKFDAEGR FIKRYLPQLA RLPSKWIHAP WLAGTERLAE FGVVLGKDYP
APIVDHAEAR ARTLARFGK
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