Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6759 |
Symbol | |
ID | 6279786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3091846 |
End bp | 3092829 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642617787 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001890424 |
Protein GI | 187921392 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.405841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGCA GCCTCGCGGA CAGCCGCGTC AAATTCCGTC ATCTCCAGTG CTTTCTGGCC GTCGCGCAGT TCGGCAGCGT CCAGCGGGCG GCCGACAGCC TGTCGATCAC CCAGCCCGCG GTCTCCAAGA CGGTGGCCGA ACTGGAAGCG ATTCTCGGCG TGAAGCTGTT CGAGCGCGGC CGCCACGGCG CCGTGCCGAC CCGCGAGGGG CAACTCTTCA TGCCGCACGC GAGCGCTTGC GTCAGCGCGC TGCGCCAAGG CGTCGATCTG CTGGCGCGCG CGGAAGGCGC GGCCGCCGCC ACGCTGGAAA TCGGCATTCT GCCGACCGTC GCGGCGGCGT TGATACCGCC GGTGCTGAAG CGGTTCGCCG CGCTCTGGCC GCGCGTGATT GTGCGCCTCG CGACGGGCGC CAACCCCGAA TTGCTCGAGC GCCTGAAAGC GGGCACGATC GAATTTGCGA TCGGTCGGCT GGCCGATCCC GAGCGGATGG TCGGGCTCAG TTTCGAGCAG CTGTTTAGCG AGCCGTTGAT TGCGGTGGTC CGTGCCGGGC ATCCGCTGGC AACGGGCGCG GGGTTGCCGG CCGCGTCGCT CGAAGATTTT CCAGTGGTGT TGCCGCCGTT CGGCACATTG ATCCGGCAAT CGGCGGACAG TCTGTTGAGC GCTTGGGGCG TGCCGCCGTT GTCGGCGTTC ATCGAGGTAT TGTCGGTTTC GACGGGCCGC GCGTTGACGC TCGAGAACGG CGCCGTGTGG TTCGTTCCGC TGAGCGCAGT CGAATACGAA CTGGCGCAAG GCATGCTGGT ACGTTTGCCA TTGCCCTTCG CCGGCACTGG CGAGCCGGTG GGGTTGATCC GGCGCTCGGA CACGCAGCCG TCGCCGGTCG GGCGGGCGTT TATCGAGGCG GTGCGTGAAG TCGCGCAGCA GCGCATGGCT TCGAGTGCGG ATAAGGCGAC AGGAAAAAGG GCGCAGAAGC GGAGCCGTAA ATAG
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Protein sequence | MQRSLADSRV KFRHLQCFLA VAQFGSVQRA ADSLSITQPA VSKTVAELEA ILGVKLFERG RHGAVPTREG QLFMPHASAC VSALRQGVDL LARAEGAAAA TLEIGILPTV AAALIPPVLK RFAALWPRVI VRLATGANPE LLERLKAGTI EFAIGRLADP ERMVGLSFEQ LFSEPLIAVV RAGHPLATGA GLPAASLEDF PVVLPPFGTL IRQSADSLLS AWGVPPLSAF IEVLSVSTGR ALTLENGAVW FVPLSAVEYE LAQGMLVRLP LPFAGTGEPV GLIRRSDTQP SPVGRAFIEA VREVAQQRMA SSADKATGKR AQKRSRK
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