| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6656 |
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| Symbol | |
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| ID | 6278121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2969791 |
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| End bp | 2970540 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642617688 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001890325 |
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| Protein GI | 187921293 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.790867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.270985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATT CACCTGTAGT ACTTGTGACT GGCGCGCTTT CTGGAATTGG TCGCGCAACA
GCCATTGCCT TTGCAAAAGA GAAAGCTCGG CTGGTCATCT CGGGCCGTCG AATCGAAGAA
GGCAGGAAGC TGGCAGAGCA ACTGCGTTCG TCGGGTGCCG AAGTGGAATT TGTGCAGGCA
GACGTGCGTT TCGAGGACCA GGTTCAAGGC CTGGTCGATC GGGTGATTTC CCGTTTTGGT
CGTCTGGACA TTGCGGTGAA CAGCGCCGGT TACGAGGGCG ACCCGGCACC GATCGTCGAA
CAGAACATCG ATCAATACGC TTTTGTTTTC GATACGAATG TTCTCGGCAC GTGGCTGGCG
CTCAAGCATG AAATCCGCGT CATGGCAGCC CAGGGCGGCG GAAGCATTGT CAATGTATCG
TCAACGATGG GTATTCGCGG CGCTCCCCAT AACGCACTTT ATGTCGCCAG CAAGCATGCG
GTCGAGGGCC TGACGAAATC CGCCGCACTC GAGACGGCGG CGATCAATAT TCGAGTCAAC
GCGGTAGCTC CGGGGCCCAT ACAGACTGAA ATGCTTGACC GCATAACGGG TTCCGAATCG
GGCAAGGCCG CGATGCTCGC TTCCGTGCCG CTTAAACGTG CGGGAACGCC TGAGGAGATT
GCGGATGCAA TCGTTTTTGT GGCGTCGGAT AAAGCGAGTT TTATGACCGG AGAAGTGCTT
CGGGTCAACG GAGGACGCAC TGCTGCGTGA
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| Protein sequence | MNDSPVVLVT GALSGIGRAT AIAFAKEKAR LVISGRRIEE GRKLAEQLRS SGAEVEFVQA
DVRFEDQVQG LVDRVISRFG RLDIAVNSAG YEGDPAPIVE QNIDQYAFVF DTNVLGTWLA
LKHEIRVMAA QGGGSIVNVS STMGIRGAPH NALYVASKHA VEGLTKSAAL ETAAINIRVN
AVAPGPIQTE MLDRITGSES GKAAMLASVP LKRAGTPEEI ADAIVFVASD KASFMTGEVL
RVNGGRTAA
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