Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6602 |
Symbol | |
ID | 6280427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2908109 |
End bp | 2909287 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642617635 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001890272 |
Protein GI | 187921240 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0727834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCAC TCGACGGTAT CAAGGTCGTC ACGCTCGAAC ACGCAATCGC GGCGCCGTTC TGTACCCGTC AACTCGCGGA TCTGGGCGCG CGGGTGATCA AGATCGAGCG GCCTGGTGTC GGCGACTTTG CGCGCGGCTA CGACGAGCGC GTGCATGGAC TGTCGTCGCA TTTCGTTTGG ACCAATCGTT CGAAGGAAAG CCTTGCGCTC GATCTGAAAC AGCCTGCCGC AGCGGAGATT CTCGACGCCC TGGTCGCCGG CGCGGACGTA CTGGTGCAGA ATCTCGCCCC CGGCGCCGCG GACCGGCTCG GTCTCGGTTA CGACACGCTG AGCAAGAAGT ATCCGAAGCT GATCGTCTGC GATATTTCGG GCTATGGTTC CGACGGCCCG TATCGCGACA AGAAAGCCTA CGACCTGCTG ATCCAGAGCG AATCCGGTTT TCTGTCGATC ACCGGCTCGC CGGGCGAGCC GGCCAAGGCG GGATGCTCGA TTGCGGATAT TGCGGCGGGC ATGTACGCGT ACTCGAACAT TCTGAGCGCG CTGCTGTTGC GTGGGCGCAC GGGGCGCGGC TGCCGCATCG ACGTATCGAT GCTGGAGAGC ATGGTCGAGT GGATGGGTTA TCCGCTCTAT TACGCGATCG ACGGTCAAAC GCCGCCCGCG CTCTCCGGCG CGGCGCACGC CACGATCTAT CCGTACGGCC CGTTTCCCGC GGGCGACGGC AAGACGGTGA TGCTCGGTCT GCAGAACGAG CGCGAATGGA AGCTCTTTTG TGAACGCGTG TTGATGCAGC CGGAACTCGC CACCGACGAG CGTTTCAACT CGAACTCGAA ACGCACGTCG GCGCGCGACG CGTTGCGCGA GGTGATCGTC GCGGCTTTTG CGAAGCTGAG TGCGGCGCAG GTCATCGAAC GGCTGGATAA TGCCGGCATC GCCAACGCGC AAATGAACTC GCTCGGCGAT GTGTGGGCGC ATCCGCAATT GCAGGCGCGC GAGCGCTGGC ATGAAGTCGG CACGCCTGCG GGCGTGGTGC CCGCGTTATT GCCGCCGGGT TTGCCGACCG ATGTCGACCC GCGCATGGAT CCGGTGCCCG CGCTCGGCGA GCATACCGAC GCGATTTTGC GCGAACTCGG CTACGACAGC GCGCGGATCG ACGCGCTGCG AGCCGCCGGC ACGATCTGA
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Protein sequence | MRPLDGIKVV TLEHAIAAPF CTRQLADLGA RVIKIERPGV GDFARGYDER VHGLSSHFVW TNRSKESLAL DLKQPAAAEI LDALVAGADV LVQNLAPGAA DRLGLGYDTL SKKYPKLIVC DISGYGSDGP YRDKKAYDLL IQSESGFLSI TGSPGEPAKA GCSIADIAAG MYAYSNILSA LLLRGRTGRG CRIDVSMLES MVEWMGYPLY YAIDGQTPPA LSGAAHATIY PYGPFPAGDG KTVMLGLQNE REWKLFCERV LMQPELATDE RFNSNSKRTS ARDALREVIV AAFAKLSAAQ VIERLDNAGI ANAQMNSLGD VWAHPQLQAR ERWHEVGTPA GVVPALLPPG LPTDVDPRMD PVPALGEHTD AILRELGYDS ARIDALRAAG TI
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