| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6575 |
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| Symbol | |
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| ID | 6279636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2867705 |
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| End bp | 2868553 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642617603 |
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| Product | GntR domain protein |
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| Protein accession | YP_001890245 |
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| Protein GI | 187921213 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00288971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00502555 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCATGG ACCGCGCCAA GGCTGGCGCC GCGATTGAGA TCAAGCAGCA AAAACGCGGC
GATCTGGTCG CGGAGGAAAT CAAGCGGCTC ATCACCGAGA AAGACCTGAA GCCGGGCGAC
CGGCTGCCGC GCGAAGTGGA GTTGCAGCAG CTCTTTTCGG TGAGCAAGAG CACGATCCGC
GAGGCGTTGA AATCGCTCGA GGTGCAAGGG CTGATCAAAG TGACCACCGG GCCGAGCGGC
GGGGGTATGG TGGTGGAGGT GCCGCTCGAT CGTACGTTGC AACTTTTGCA GAACTACCTG
TTCTTCAAAG ACGTTTCGAT CGACGACATC TATACCGTGC GCAAACTGCT GGAGCCCGAA
CTCGCGGCGG GGGCCGTGCC GCACCTGACG GAGCAGGACT TCGAAGCGCT CGACGCGAGC
ATTGCGTGTT GTGATCAACC GGCGTCGTCA CATGGCGGGA AAGACATCGT GCGGCAGCGG
CAGGAAGACG TGAATTTCCA CGACATCCTC GCGGCGGCGA ATCCGAATCC GTTCCTGCGT
TTTAGTTGCG AGTTGATCAA TGAAATGATC CGGCAGCTCA TCGAGTTTCG TAACGACACG
CCGCAAGCGG AGCATGAGCG GTTCGGTCAG GCGAACGTCA AGATTCACAA AGCGATTACA
AAGGCTGCGC GTGAGCGTGA TGTGGAGAAG GTGCGGGAGT TGATGGTGAT CCACATGACC
GAGGCGCCAC GCTATGTGAA GCGGATGAAG GGGAAGTTGC GTGGACGTTT GATTTTGGAT
TCGGAGATTC GTCGAAGAGC GCGGGCGCGG AGTGTGGCGC CGGGTTCGGA TGAGGGTGAG
GTTGGGTGA
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| Protein sequence | MAMDRAKAGA AIEIKQQKRG DLVAEEIKRL ITEKDLKPGD RLPREVELQQ LFSVSKSTIR
EALKSLEVQG LIKVTTGPSG GGMVVEVPLD RTLQLLQNYL FFKDVSIDDI YTVRKLLEPE
LAAGAVPHLT EQDFEALDAS IACCDQPASS HGGKDIVRQR QEDVNFHDIL AAANPNPFLR
FSCELINEMI RQLIEFRNDT PQAEHERFGQ ANVKIHKAIT KAARERDVEK VRELMVIHMT
EAPRYVKRMK GKLRGRLILD SEIRRRARAR SVAPGSDEGE VG
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