Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6556 |
Symbol | |
ID | 6277794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2846390 |
End bp | 2847820 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642617583 |
Product | selenocysteine synthase |
Protein accession | YP_001890226 |
Protein GI | 187921194 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0759041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00101657 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAGCGATG TAAGCGGCTC TGAATTACGG GCGTTGATGG CGCGCGTGCC GTCGGTGGAA AAGGTGATGG CGTCGGCCGA GTTCGCGGCG CTGCTCGCAG AATATGGCCG CACGCAGGTG TTGGGCGCGG TGCGCGAAGC GCTCGACACA TGGCGCGCCG GCGCGCAATC GGGCGATGCG TCCGTGAGCG CGCTCGACGT CGCGCAACTT AAGAGCGCGG TCGAAGCCGC GCTACGCAAG CGCCACGAGT CGCGCTTGCG CAGCGTTTTC AATCTGACCG GCACGGTGCT GCATACCAAT CTCGGTCGCG CATTGCTGCC CGACGAGGCG GTTCAGGCCG TCATGAAAGC GCTCACGCAA CCCGCCAACC TCGAGTTCGA TCTCGGCACC GGTAAGCGCG GCGACCGCGA CGATCTGATC GACGAGCTCA TCTGCGAATT GACCGGCGCC GAAGCGGCCA CCGTGGTCAA CAACAACGCG GCCGCGGTGT TGCTCACGCT GTCCGCGTTG GCGTCGAAGA AAGAAGTCAT CGTGTCGCGC GGCGAGCTGG TTGAAATCGG CGGTGCGTTC CGCATTCCCG ACATCATGAG CCGCGCGGGC GCGAAATTGC GTGAAGTCGG CACGACGAAC CGCACGCATC TGAAGGACTA CGAGGAAGCC ATCGGCCCGC AAACCGCGCT GCTGATGAAA GTCCACGCGA GCAACTATGC GATCAGCGGC TTCACCAAAG AGGTCGGTCT GAATGAAATC GCGCCGCTCG CCCACGCGCG CGGCCTCGCG GTTGCCGTGG ATCTCGGCAG CGGCACGCTG GTCGATCTGA GCCAATGGGG CTTGCCGCGC GAGACGACGG TACGCGAAAC CGTCGAGGCC GGTGCGGACC TCGTCACGTT CAGCGGCGAC AAGTTGCTCG GCGGTCCGCA AGCCGGTTTG ATCGTTGGGC GACGCGATCT GATCGCGAAG ATCAAGAAGC ATCCACTCAA GCGCGCGTTG CGCGTCGGCA AACTGACGCT CGCGGCGCTG GAGCCTGTGC TGCAGCTTTA TCGCGCGCCG GAGAGGCTCA CGGAGCGGCT CACTACGCTG CGCTTATTGA CCCGTGCCGC CGATGACATC CGGCTCGCTG CGGATCGCGT GCAGCCCGCG TTGCAGCACG CAGTCGGCGA ACGTTATGCG GTGACGGCGG AGCCGATGTT CAGTCAGATC GGCAGCGGCG CGTTGCCGGT CGACGTGCTG CCGAGTTATG GTCTGGTCGT CAGAATGGCG GACGGCAAAC GCGGCGGCCG TCAATTGCTT GCGCTCGAAA AGATGTTGCG GGAAATGGCG CGGCCCGTGA TCGGTCGCAT CGCGGACGAT GCGTTGCGTC TCGATCTGCG CTGCCTAGAA GCCGCCGACG AAGCGCAACT GGTCGAGCAA CTGAAAGGCG CGCGCGCATG A
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Protein sequence | MSDVSGSELR ALMARVPSVE KVMASAEFAA LLAEYGRTQV LGAVREALDT WRAGAQSGDA SVSALDVAQL KSAVEAALRK RHESRLRSVF NLTGTVLHTN LGRALLPDEA VQAVMKALTQ PANLEFDLGT GKRGDRDDLI DELICELTGA EAATVVNNNA AAVLLTLSAL ASKKEVIVSR GELVEIGGAF RIPDIMSRAG AKLREVGTTN RTHLKDYEEA IGPQTALLMK VHASNYAISG FTKEVGLNEI APLAHARGLA VAVDLGSGTL VDLSQWGLPR ETTVRETVEA GADLVTFSGD KLLGGPQAGL IVGRRDLIAK IKKHPLKRAL RVGKLTLAAL EPVLQLYRAP ERLTERLTTL RLLTRAADDI RLAADRVQPA LQHAVGERYA VTAEPMFSQI GSGALPVDVL PSYGLVVRMA DGKRGGRQLL ALEKMLREMA RPVIGRIADD ALRLDLRCLE AADEAQLVEQ LKGARA
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