| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6550 |
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| Symbol | |
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| ID | 6279742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2841067 |
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| End bp | 2841669 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642617580 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_001890223 |
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| Protein GI | 187921191 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000124296 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0144339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAGCAA GCAAGCGGAA AATGGTGGTG GATACCGCGA CGCAACTCTT CTCGATGCAC
GGCTTCCAGT CGATCGGTAT CGAGCGGATT ATTAGCGAAT CCGGGGTCGC GCGCATGACT
TTGTACCGGA ACTTCGCCGG CAAGGACGAT CTGATCCACG CGGTCCTTGG CCAACGGTAC
GAACTCATCT TCGCAAGCGT CGAGACGCAC ATGCGTGCGC AAGAGGACCC GGAGACCAAG
GTGAAAGCGG TCTTCGACTG GTATGGAGCG TGGTTCCGTG CTCCCGAATT TGCCGGCTGC
CTGTTCGAGC GTGCGCTTGC CGAGTTCGGA CGGGATCACC CGAAGATATC AGAGGTCGCC
ATTCGCTATC GTCGGGACAT GACGCGGCTA ATGGCGGGCA CGCTGGAAGA GATACTCCCC
ACCGCGAAAG CAACATGGTT GAGCGGCATC TTCATGTTGC TTCTCGATGG CGCCACCGTT
GAAGCCCGAG CGTCAAATAA TGCCCATTGC GCCACGGAGG CTTGGCATGC GGCCAAAGCC
CTTCTGACGC AACATTTACC AAGCTTGCCT CCAGCAAAAA AAATCTCCCG AAAAGGGAAG
TAA
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| Protein sequence | MRASKRKMVV DTATQLFSMH GFQSIGIERI ISESGVARMT LYRNFAGKDD LIHAVLGQRY
ELIFASVETH MRAQEDPETK VKAVFDWYGA WFRAPEFAGC LFERALAEFG RDHPKISEVA
IRYRRDMTRL MAGTLEEILP TAKATWLSGI FMLLLDGATV EARASNNAHC ATEAWHAAKA
LLTQHLPSLP PAKKISRKGK
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