| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6531 |
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| Symbol | |
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| ID | 6277316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2818389 |
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| End bp | 2819576 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642617562 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001890205 |
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| Protein GI | 187921173 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.158369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA GTGCGGTTTT GGGTTTGGGG TGTACGATTG CAGCAGCGTG CGCTATGCCG
AGTTTGGTCC ACGCTCAGGG AAGCGTAACG CTGTATGGCC TCATCGACGA AGGCTTCAGC
ATGTACACGA ATGTCGCTGG CAAACATCAA TACTTGCTGA ACAGCGGCGT GATGCAAGGC
AGTCGATGGG GACTGAAAGG AGCGGAAGAC CTTGGTGGAG GTTACAAGAC GGTATTTCGC
TTGGAAAGCG GATTTGATGC GAGTACAGGG AAACTTTCGC AAGGCGGACT TGGTTTCGGT
CGGCAAGCCT ACGTTGGCCT GGAAAGCCCC TATGGCACTG TCACACTTGG TCGACAGTAT
GATTCGGTGG TCGACAATCT TGGGCCATTG GAAGCAGGCG ACCAATGGGG TGGCTACATC
GCCGCGCACC CGGGAGATAT CGACAACTTC AACAATCAGT TTCGGACCAA TAATGCTATC
AAGTACACAA GCAAAGCCTT TGCCGGTTTC AGGTTTGGTG GCATGTATAG CCTTGGCGGG
GTAGCGGGAG ACGTCACCAG GAATCAGGTT TATTCATTCG GCGGGCAGTA TGCCAACGGT
CCGCTCGTAG TCGCCGCGGC ATATTTAAAC GCGAGGAATG CGAACGCGGG GTTTTTCGGG
AACAGTACTT CGGGTACAGT CAATCCGAGC ATTTCCAATC TTCCGTCGCC CGTATATAAC
GGATACGGCT CCGCCCACAC GTACCAAGTA ATCGGCACGG GCGCCGCGTA CACATTCGGT
GCGGCCACCA TTGGCGGCAC GTACTCCAAC ATCAAGTTCT ACAACCTCGG ACAGTCCTAC
CCGTCGGCGT TCCGTGGACA GACGGCCGGC TTCAATAACT TTGAAGTGAA TTTCAAATAT
CAGTTCACCC CCGCACTCCT CGTCGGTGTC GCATACGACT ATCTGCGTGC AGGCAGCATC
AACGGCTTCT CCGCAGCAAA GTACAACCAG GGCTCCGCTG GCGTGGACTA CTTCTTGTCC
AAGCGTACGG ACGTCTACGT GACCGGCGTG TATCAACATG CGAGTGGTTA CGCAGCGAAT
TCCGCTGGTA CTGCCATGGT CCCCGCGGTC GCGGCAATCA ACGGGCTGAC CGGCTCGTCG
GGGCCGAACC AATTCACCGC ACGTGTGGGG ATTCGTCACC TCTTTTAA
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| Protein sequence | MKKSAVLGLG CTIAAACAMP SLVHAQGSVT LYGLIDEGFS MYTNVAGKHQ YLLNSGVMQG
SRWGLKGAED LGGGYKTVFR LESGFDASTG KLSQGGLGFG RQAYVGLESP YGTVTLGRQY
DSVVDNLGPL EAGDQWGGYI AAHPGDIDNF NNQFRTNNAI KYTSKAFAGF RFGGMYSLGG
VAGDVTRNQV YSFGGQYANG PLVVAAAYLN ARNANAGFFG NSTSGTVNPS ISNLPSPVYN
GYGSAHTYQV IGTGAAYTFG AATIGGTYSN IKFYNLGQSY PSAFRGQTAG FNNFEVNFKY
QFTPALLVGV AYDYLRAGSI NGFSAAKYNQ GSAGVDYFLS KRTDVYVTGV YQHASGYAAN
SAGTAMVPAV AAINGLTGSS GPNQFTARVG IRHLF
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