Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6525 |
Symbol | |
ID | 6278026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2812045 |
End bp | 2812782 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642617557 |
Product | protein of unknown function DUF969 |
Protein accession | YP_001890200 |
Protein GI | 187921168 |
COG category | [S] Function unknown |
COG ID | [COG3819] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.120098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCG CCATAAATTT CTGGCCCCTA ATCGGCGTCG CCGTGGTTGC AGTCGGATTT ATCCTCCGGC TCAATCCGAT GATGATTGTA TCAGTGGCAG CAGTAATTAC TGGCTTCCTG GCTAAAATGT CGTTCCACGA TATTTTGGCA GTGATGGGTG TTGCTTTCAT AAAGTTCAGA AATCTTCCCC TGATTACGCT TCTCCCGCTG CCTATTATCG GTCTCCTGGA GCGTCATGGA TTACGAGAGT TCGTGCAAAC CGCAATCGGG AAGGTCCGAG CCGCAACTAC GGGACGATTC CTCATTTGTT ACCTCTTCGT GCGCGAAACA TCCGCCTCCG TTGGGCTAGT GAGTTTAGGC GGTCAAGCTC AAATGGTGAG ACCACTAATC GCGCCGATGG CCGAGAGTGT CGCCGAATCG CAGCATGGGA AGCTTGCACC TCATCAGGCG CATCGCATTA GAGCGTTTGC CGCTGCTAGC GACAATATTG GCTTATTCTT CGGCGAGGAT ATTTTCATCG CTTTTGGCGG CGTGCTGTTT ATGCAAGCGG CTCTCCGAAC TGCGGGTATT GAAGTAAGTG CAATACAAAT TGCGTTCGCT GGCATCCCAA CAGCAATATG CGTCTTTTTG ATTCATTCTT TTCGCCTCTA CCGACTAGAC GCGTGGCTGG AGCGTGACAT TAAACGTTCG CTTGAACAGA CAAAGGTGCC GGCCGTGAAC CAGGAGTGTC GTTCATGA
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Protein sequence | MNTAINFWPL IGVAVVAVGF ILRLNPMMIV SVAAVITGFL AKMSFHDILA VMGVAFIKFR NLPLITLLPL PIIGLLERHG LREFVQTAIG KVRAATTGRF LICYLFVRET SASVGLVSLG GQAQMVRPLI APMAESVAES QHGKLAPHQA HRIRAFAAAS DNIGLFFGED IFIAFGGVLF MQAALRTAGI EVSAIQIAFA GIPTAICVFL IHSFRLYRLD AWLERDIKRS LEQTKVPAVN QECRS
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