| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6498 |
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| Symbol | |
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| ID | 6280280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2788418 |
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| End bp | 2789662 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642617532 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001890175 |
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| Protein GI | 187921143 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG ACATCCGCAA CACGATCGAA CCGGATGATC CGTCCGACCG TCGTCCGGAT
GGCGCTAGCC CGAATGGCAT CAACTGGTCC GCGGAGCCGC TTGATCGGGG CATGCCTGCA
CTCGGGCAGT ACGGGGGCAC GCGCCCGCGC GCCTGGTGGC TGACACCGCT GGTGGTTGTT
CTCGTGGCCG GCGCTGGTGC GGTCTGGACG GTTCACACGT TCCTCGCACG TCACGACGCG
GAGGCGAAAG CGCACCGCGA TGCGGTGCAG GATACCGCGA CGCAGGGACG CGTTTTCAGG
GACGCGCCGG TGGCCGCGAG CGCGGCGTCC AGACCGGTCG CAACAATTGC GCCTGCCGCG
GTCTCGGGCC CGGTTGTCGC CCGTCCGCCT GTCGCGGTCC AGCATCCGGC GTTGGTCCGG
AGTTACTACG ATGCGCCGTT ACTTGCGGTC GGTAATACGC CCGGCGCCAG TGGCCGGAGG
GAAGGCCTGG CGGACGGGCT TGCTGCCGGG GGCGTTCCAG GCAACGTCGT GGACGCAGCT
TCTTCGGTCG CGGCATCGGT ATCCGGCCGG CCGTTGACGA CGCCGGGCCA AGGCGGGATC
GGGGCACTTG ACCAGGCGTT GACCCCGACC GCCACGCCGC GGGTGCATGC CGGCACGATC
GGTGACCGCA GCCTGGTGCT CGCGCAGGGA GCCAAGATCG ATTGCGCAGG CGACACGGCG
TTCGATTCGA CGGAAGCGGG GCTGTCGACC TGCACGGTGA CGAAGAACGT CTATTCCGAT
GACGGGCGGG TCGTGCTGAT CGAGCGTGGA TCGCAGATCG ACAGCCAGTA TCGTTCGAAC
CTGTCGCCCG GCCAGAAGCG GACGTTCATC CTCGCGGCCC GTATCGAGAC GCCCCACGGC
GTGACCGTCG AGATCGATTC TCCGGCAGCG GACGCGCTCG GCCGCATGGG GATCGATGGC
TATGTCGACA ACCACTGGGG GCAGCGCATC GGCGCCGCGA TGCTGCTCGG CATCACCCAG
GACGCGATCG GGTATCTCGC CACGCGAGGC GGTAACAGCA ACGGGTCCGT CGTCTACGAG
AACACGCAGC AGCAGGGTAA CGACATGGCG ACGCGGGTGC TCGACAGCAC GATCAATATT
CCGCCGACGC TGACACAGAA CCAGGGCGCG GAATTCACGA TCGTCGTCGC GCGCGATCTC
GATTTCGGAA CGGTCTATGC ATTGCAGCCG GAGCGCGCGC CATGA
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| Protein sequence | MSDDIRNTIE PDDPSDRRPD GASPNGINWS AEPLDRGMPA LGQYGGTRPR AWWLTPLVVV
LVAGAGAVWT VHTFLARHDA EAKAHRDAVQ DTATQGRVFR DAPVAASAAS RPVATIAPAA
VSGPVVARPP VAVQHPALVR SYYDAPLLAV GNTPGASGRR EGLADGLAAG GVPGNVVDAA
SSVAASVSGR PLTTPGQGGI GALDQALTPT ATPRVHAGTI GDRSLVLAQG AKIDCAGDTA
FDSTEAGLST CTVTKNVYSD DGRVVLIERG SQIDSQYRSN LSPGQKRTFI LAARIETPHG
VTVEIDSPAA DALGRMGIDG YVDNHWGQRI GAAMLLGITQ DAIGYLATRG GNSNGSVVYE
NTQQQGNDMA TRVLDSTINI PPTLTQNQGA EFTIVVARDL DFGTVYALQP ERAP
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