Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6493 |
Symbol | |
ID | 6278595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2781706 |
End bp | 2783229 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642617527 |
Product | putative DNA primase, DNA transfer TraO-like protein |
Protein accession | YP_001890170 |
Protein GI | 187921138 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.255427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAA CCCTGTCGCC TGCCACGCCG CTCGTTAATG TGATCGAGCA GGATATTCTT GGACATTCGC CATCCGTTGA ACACACCAAA GGTGATGGCG ATACCAGTCG CCTCGACGCG GCGGCCATGG ATGCTGTGTC GGCCCGGCGC TGGCGTGAGT TTGACGCGGC ACGGGCGCGT CTGCGTGATC AGGCCATCCG GGACGATGCG GGTGTGTCAC ATCGGTCTGC ATCCCGTGCA ACCGGCGACG GGCCAACCGG ACAGGAAGAT CCCGCTGCTG TTCGCGCGCC GCTTGACCAG CCGCCGGAGC GCGTACGCAA ACGCTACCTG CGGGCCGGTA ACCAGTATTT CCTGAAGGAT GCGCCGTATC AGCTCGCGTT CGAGGATATC GGACCGTACC TTGTCACCGA ACACAACCGG CCGGACGTGG TGGAGTCGAT GGTCGACATG GCGGCGTCGA AACCGTGGCG TCGTATTCGC GTGTCCGGCC ACGAGGCGTT CCGCAGCCAA GTATGGCTGC AGGGATCGTT GATGGGCATC GAGGTCAGCG GGTATGAGCC AAAGGCCGCC GATCTGGCGC GTCTGGCCGA TGCGCGGCAG GGGCGTCTGA ATAACCGGAT CGAAGCGGAT GCGTCATTGC GTGCGGCCGG TTCGACGATA GATGTAGCAG AGCGCAGTCG TGCAACGTCT GCACCCGCGC CGGCCGCCGT ACCGACGGGT GTGGACGATG GCGCCTCACC CGCAGCCCTG CGACGTGATG CTCAGCGGGT TGAGCCTCAT GACGCGAAGC GACAGCCGGC AGCAGGCGAT GAAGCCGATA CACCGAGGCG ATATACGGGC GAGCTGCGCG AGCACGGTGG TGCGCCGTAT CAGAATAATC CTGCGCGCAG CGAGTCGTAC TACGTCGTGT TCCGCGATGC GACAGGCGCG GATCACGTCG TCTGGGGTGT AGATCTCGAA CGCGCGATGC GCGAATCGGG CGCGCAGCCC GGGCAGCAGG TCGCACTTGA AAACCTGGGG CGACGGCTCG TCACGGTCAA GGTACCGATC CTGAACGAGC ACGGTGTAGT GGTCGGTGAA GACGAGCGTG ATGTGCACCG GAACACTTGG CAGGTAGATG TGATGGGACG GGAGCGTACG GCGGCGCAAT CTGTGTCAGA AGCCGAACGC GCAGCAGGAG CAGACGCGAC ACCTGCGGGC ACGAATGCGC GCGAAAGCGG CCATGGGCTT CGACGGTCGA GTGTCTTCGA TGAAGACAAG GTGCTGCATC TGGCTGTGCT CGCCAGCGCG ATGCGGGAGC AGGGTTTCAG TGCGCGCTCG ATCGGACGCG TGCAACGGCG TGCAGAAGCG CTGCTGGATG CGTTTGGTCG CGAGGGCATT CCCGTCCCGC GGCCGAAGGT CTTCGATCCG AAAGCGCCGT CGGAACGGGA TCGTCGGACA CGCACAGCGG TCGGACGTGC GTCTGCGCGA GATATCGAGC TTGAACTGGT GCACACGCCC GTCGAACCCT CGCCGGCGCG CTAG
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Protein sequence | MSETLSPATP LVNVIEQDIL GHSPSVEHTK GDGDTSRLDA AAMDAVSARR WREFDAARAR LRDQAIRDDA GVSHRSASRA TGDGPTGQED PAAVRAPLDQ PPERVRKRYL RAGNQYFLKD APYQLAFEDI GPYLVTEHNR PDVVESMVDM AASKPWRRIR VSGHEAFRSQ VWLQGSLMGI EVSGYEPKAA DLARLADARQ GRLNNRIEAD ASLRAAGSTI DVAERSRATS APAPAAVPTG VDDGASPAAL RRDAQRVEPH DAKRQPAAGD EADTPRRYTG ELREHGGAPY QNNPARSESY YVVFRDATGA DHVVWGVDLE RAMRESGAQP GQQVALENLG RRLVTVKVPI LNEHGVVVGE DERDVHRNTW QVDVMGRERT AAQSVSEAER AAGADATPAG TNARESGHGL RRSSVFDEDK VLHLAVLASA MREQGFSARS IGRVQRRAEA LLDAFGREGI PVPRPKVFDP KAPSERDRRT RTAVGRASAR DIELELVHTP VEPSPAR
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