Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6461 |
Symbol | |
ID | 6278983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2732882 |
End bp | 2733655 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642617496 |
Product | GntR domain protein |
Protein accession | YP_001890139 |
Protein GI | 187921107 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0712738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00000516822 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTGGACA ATGTCCGACA ACTCGTGCAG CTCATTCATG AACGAGGCTT TGAGCCAGGC GACAAACTTC CTTCCGAGCG CGAGATGTCA GAGATGTTCG GCATGAGTCG GGGGGCATTG CGCGAAGCGT TGATTCGTCT TGATACGTTA CGCATTGTCG ATGCGCGTCC GAAATCCGGC ATTTACCTGC GTGCCGGCTC AGCCGACCGT AGCATTGAGG CGATGGTGCT GTTCGCTGAG GCGGATGCGC CTTTGGCTCC GGACGAAGTA ATCCAAGCCG TCGAATTGCG GCGTCTGCTC GAAACGCAAG CGGTTCGCCT AGCTTGTGAG CGGCGTACAG ACGATGACCT GGAGCGGCTC TCCGGCATCG TGAAGCGTTG TGTCGCTGCG CGGGGCAACG GTGAAAAACT GGCAGGCCTG GACGCGGAGT TTCATCTCGC AATCGTCGCA GCTACTCAGA ACGATGTGTT TGCGCGTTTC ATCAACGTGT TTTATCTGAT GTCGAGAAAG CGTCGTGAAG TTTATTTTTC TTCTGATGAG CATTGCCGGC AATCAGTTAG CGATCATCGT AAATTGCTGG CAGCGATCGC TGAACGCGAT GTTGACAAGG CAGAAAATAT ACTACGGCAG CACATCAAGG GGGTCGACGT CTACTTCCGT ACACTGTTTG CGGCGTCGCC GGACGACGGG GTGCCATCGT CTTCATCTGT GGTGAAGCGG ACGAAGAAAA AGTCCGCGAC GCGCAAGTTG GTACCTGCTG ACGGGGTTGT ATAA
|
Protein sequence | MLDNVRQLVQ LIHERGFEPG DKLPSEREMS EMFGMSRGAL REALIRLDTL RIVDARPKSG IYLRAGSADR SIEAMVLFAE ADAPLAPDEV IQAVELRRLL ETQAVRLACE RRTDDDLERL SGIVKRCVAA RGNGEKLAGL DAEFHLAIVA ATQNDVFARF INVFYLMSRK RREVYFSSDE HCRQSVSDHR KLLAAIAERD VDKAENILRQ HIKGVDVYFR TLFAASPDDG VPSSSSVVKR TKKKSATRKL VPADGVV
|
| |