| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6459 |
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| Symbol | |
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| ID | 6277416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2731170 |
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| End bp | 2732303 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642617494 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001890137 |
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| Protein GI | 187921105 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0253922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000000313702 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATAG CGGACATCGT TGCGTATCCC GTCACTGTCC CTGTGCCCCC CCAGTATCAG
GTAAGTCTCG GCATCGGTCG GATGGTCAAA CGCGACACAG TCATAGTAAA AGTGACAACG
GATGAAGGAA TTGTCGGATG GGGTGAGTCG CATCACGGAA GGGCTCACCT CGCCATTGCC
ATGCTTGTGA ACACGACTCT CAAGCAACTC GTGGCCGACC TTGAAGCTAC CGATGTCAAT
GGCGTTTGGT CGCAAATATA CCGGTATCAG CTGGCCTCTC ATGGCATGGG GGCCGCATGT
GCGGCCGCAA TGAGCGGCAT CGATATGGCG CTTTGGGACA TTCGCGGCAA AGCAACCGGC
TGGCCTCTGT ATCGGTTGCT CGGCGGTACG TCTCGCAGCG TCCCAGCGTA CGCCGGCGGA
ATCTGCCTTG GCTTTCAGAC GCCCTCTGCG TTGCTCGAAG AGGTCGAAAC AATGGTACGG
CGAGGCTATA AGGCCATCAA GCTCCGTTTA GGAGACTCGC CCGCAAACGA CATCGCACGT
GTTGCAGCAG TGCGTGAAGC CTATCCTGAG CTCGACATTC TGACGGACGC TAATACAGCC
TATTCGCTAC GTGACTTTCG TATGGTAGCT CCGCATCTCG ACGCAGCACA CGTCGGCTGG
CTAGAAGAGC CGTTTCCGGC GCACGATTAC CGTAGCTATC GAGAAGCGAA GAAGATGTGC
CGATTTGCAC TTGCTGGCGG CGAGAACCAT TTTACCCGCT TCGAATTCGC GCAATTAATA
GACGCGGAGT CGATAACGAT CCTTCAGCCC GATCTGTCGA AAGTGGGTGG AATCAGCGAA
GCGATGAAGG TCGCGACCAT GGCATCCGTA CAGAAACTGC CCGTTCATTG CCATTCGAGC
ATGGGTATCA ATATGGCGGC AACGCTGCAC GTTCTAAGTG CGATTGATAA TGCCGGCTAC
TTCGAAGCAG ACTGCTCGCT GTACAACCCG CTGCGCGACG ATCTGATTGA CTTCTCCTTT
GCCATTAATG CAGACGGCAC ATTGCGGCCC AGCGAAAAAC CAGGCATTGG CATAGAGATT
AACGAGGATT TCATTAAACA CCACGCAGGG TCCAGTGGCC CCGGGTTCGT TTGA
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| Protein sequence | MKIADIVAYP VTVPVPPQYQ VSLGIGRMVK RDTVIVKVTT DEGIVGWGES HHGRAHLAIA
MLVNTTLKQL VADLEATDVN GVWSQIYRYQ LASHGMGAAC AAAMSGIDMA LWDIRGKATG
WPLYRLLGGT SRSVPAYAGG ICLGFQTPSA LLEEVETMVR RGYKAIKLRL GDSPANDIAR
VAAVREAYPE LDILTDANTA YSLRDFRMVA PHLDAAHVGW LEEPFPAHDY RSYREAKKMC
RFALAGGENH FTRFEFAQLI DAESITILQP DLSKVGGISE AMKVATMASV QKLPVHCHSS
MGINMAATLH VLSAIDNAGY FEADCSLYNP LRDDLIDFSF AINADGTLRP SEKPGIGIEI
NEDFIKHHAG SSGPGFV
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