| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6420 |
|---|
| Symbol | |
|---|
| ID | 6277715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 2686893 |
|---|
| End bp | 2688293 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642617461 |
|---|
| Product | Amidase |
|---|
| Protein accession | YP_001890104 |
|---|
| Protein GI | 187921072 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGGAGG CAGCGCGTTC AATTCGCAGA GGTGAAATGA CGTCAGAGCG ATATACGCAG
GTTCTACTCG AACGCACCCG CAGTCTGTCA TCTTTGAACG CGTTCATTAC CGTGGAGGAC
GCGACGGTCC TTGACGCGGC GCGCAATGCC GACAAAGCAC GCCTTGCAGG TCGGGCAGTG
GGATTACCTG GGCTGCCAAT CGGCATTAAG GATAGCTACA TGACCCGGGA TCTTCCAACG
AGTTTCGGAA CCGCAGTCGC CGCCGACTTC AGACCCACAA CCGACGCACG CGTCGTGAAA
GCGATGAGGG AGGCCGGTTT GCTCGTATTT GGAAAGAACA ATCTGGTCGA AATGTCATAC
GGCCTGACGG GTCTCAACGG ACATTATGGA CAGGCGAAGA ATCCCTACAA CCCGCTCCAC
ATTACTGGTG GATCCTCCTG TGGTGGTGCG GCGAGCGTAG CTGCGCGTTT GGTGCCGGCA
GCCCTCGGCG GTGATACCGT CGGTTCGATT AGGGTGCCTT CGTCGCTGTG CGGTGTCGTC
GGATTCAAGC CGACGCCCGG GCGATGGTCC AGTAAAGGCG TCGCCCCCAT CTCCGGAACT
CTCGATACGA CCGGCGCGAT CGCACGTCGT GTCGCAGACT GCGAACTACT GGATTCAATC
GCGACGGGCA GTCATTCAAG GATCAATCGC GCGATTCACG GTTTGAAAGG CATCAAACTC
GCGATCGCGC CTCGGTACTA CCTCGACGGT GCAGACCCAG AGATCGAAAA GCTCTTTAAC
GAAACAGTAC GAAAACTGAA GGACGCAGGC GCGCACGTCG TTGAAGTAGA TCTTGGAGCG
GATTTCGGAT CGCTCGTCGC ACATGGCAAC TGGTCGGTCT TCTTTCACGA AACGCAACCT
GATGTCACGA TTTTCTTGCG TGAGAACGGT GTACCGGTGA CTGTCGAACA GATTTACGAC
GGCCTCGAAC CTCATATCAA GGCCAGTTGG ACACGCTCCG TGCTGCCGAC TGGACCCAAC
TACACGACAG ACGCCAGCTA CAAAGACGCG CTGCTAAATA GCCGTCCGGA AGTTCAGCGT
CGATACGGGA ATTTGGCCTT TTCGAAAGCG GATGCGGTTA TCTTCCCGAC CACGCTTTGC
CAGGCGCCGC TCATTACAGA GCAGTGGCAA TATCCGGTAG CGGGAAAGGT AGTGAATGAT
ACTTTCCTCT CACGAAACAC CTATCCGGCA AGCTTCGCTG GTCTGCCCGG AATCTCACTT
CCTATGGGAT TGCTCAACAG CGGCCTGCCA GTTGGGCTGG AAATAGACGC GGGCCATGGG
AGCGATAAGG AACTGCTGCA ACTCGCACGT CGTATCGAAG AAGTTATCGG TTTTATACCG
GCCCCGTCGA ACCTCGCATG A
|
|---|
| Protein sequence | MLEAARSIRR GEMTSERYTQ VLLERTRSLS SLNAFITVED ATVLDAARNA DKARLAGRAV
GLPGLPIGIK DSYMTRDLPT SFGTAVAADF RPTTDARVVK AMREAGLLVF GKNNLVEMSY
GLTGLNGHYG QAKNPYNPLH ITGGSSCGGA ASVAARLVPA ALGGDTVGSI RVPSSLCGVV
GFKPTPGRWS SKGVAPISGT LDTTGAIARR VADCELLDSI ATGSHSRINR AIHGLKGIKL
AIAPRYYLDG ADPEIEKLFN ETVRKLKDAG AHVVEVDLGA DFGSLVAHGN WSVFFHETQP
DVTIFLRENG VPVTVEQIYD GLEPHIKASW TRSVLPTGPN YTTDASYKDA LLNSRPEVQR
RYGNLAFSKA DAVIFPTTLC QAPLITEQWQ YPVAGKVVND TFLSRNTYPA SFAGLPGISL
PMGLLNSGLP VGLEIDAGHG SDKELLQLAR RIEEVIGFIP APSNLA
|
|---|
| |