| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6406 |
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| Symbol | |
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| ID | 6279456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2671058 |
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| End bp | 2672203 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642617448 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001890091 |
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| Protein GI | 187921059 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC GAATCATTCC CGCCTTGATG GCATCCGCAC TCGCAACCTC GGCAATGGCA
CAGAGTTCGG TGACGCTTTA CGGCGTTATC GACGAGGGTT TCGACTACAC CAACAATGTT
TCCGGCAGTA AAGTGTACGA GCTGCAGAGC GGCTTCGCGC AGGGGAGCCG CTGGGGTCTT
AAGGGAACAG AAGATTTGGG TGGCGGCCTG AGAGCCGTCT TTCAACTCGA GAACGGTTTC
AACCTCAACA ACGGTCGCCT CGGGCAGGGC GGACTGATGT TCGGCCGCCA GGCGTACGTT
GGTCTTACCT CCGACAGCTT TGGCACGGTT ACGCTCGGTC GCCAGTATGA TTCGGTGGTC
GACTATCTTG GTCCGGTAAC GGCGAACGGT AACTGGGCCG GTTATTTATT CTCCCATCCG
TACGATAGCG ACAACACTGA CAATACATTT CGCGTTAACA ACACTGTCAA ATACACCAGC
CCGCTCTTCG GTGGCCTGCA GTTCGGTGGT ACGTATAGCT TCAGTAACGA CTCCGGCTTC
GCGAATAATC GGCAATACAG TGCCGGCGGA ACCTATACGG TTGGCGGCCT CGTTCTCGCG
GCGGCCTACT TGCAGGCGAA CAGCCCGTCA GCTACCGCTG GCGGCGCGAT AAATAATGGT
GGCGATGAAA ATTTTGTCGC CAACGCGCTA CGTGTGTTTG GTGCAGGTGC AAGCTACACC
TTCGGCCTTG CAAACGTCGG CTTCGCCTAC ACTAACAGCT ACGTACGACG CCCTGTGAGT
TCCGGATACG TTGGTGCTAT TACGCCGGCC TCGGGTACGC TCTCCAGCCT GAGATTCCAG
AATTTCGAGG TGAACGGAAA GTACCAGTTC ACGCCTGCTT TCTACGTTGG TGCGATGTAC
GTGTATACAC GTACCGACTT CAATTCAAGC GGTGGGCAGT TGAACCCGAT CTATCAAAGC
GTCGGTTTGA TGGGAGATTA TCTTCTGTCC AAGCGCACGG ACGTTTACGT TCAGGGCGTC
TATCAGCATG TTGGTGGTGA TCGCACCGGC ACGGTATTAG ACGTTGCCTA TATTCCGGGC
GCCGATGGTG TGTCGAGTGG CGGCAATCAG GTGGTCGTAC GCGTCGCACT GCGGCACAAG
TTCTAA
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| Protein sequence | MNKRIIPALM ASALATSAMA QSSVTLYGVI DEGFDYTNNV SGSKVYELQS GFAQGSRWGL
KGTEDLGGGL RAVFQLENGF NLNNGRLGQG GLMFGRQAYV GLTSDSFGTV TLGRQYDSVV
DYLGPVTANG NWAGYLFSHP YDSDNTDNTF RVNNTVKYTS PLFGGLQFGG TYSFSNDSGF
ANNRQYSAGG TYTVGGLVLA AAYLQANSPS ATAGGAINNG GDENFVANAL RVFGAGASYT
FGLANVGFAY TNSYVRRPVS SGYVGAITPA SGTLSSLRFQ NFEVNGKYQF TPAFYVGAMY
VYTRTDFNSS GGQLNPIYQS VGLMGDYLLS KRTDVYVQGV YQHVGGDRTG TVLDVAYIPG
ADGVSSGGNQ VVVRVALRHK F
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