Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6382 |
Symbol | |
ID | 6278171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2641395 |
End bp | 2643185 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642617426 |
Product | glycoside hydrolase 15-related |
Protein accession | YP_001890069 |
Protein GI | 187921037 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAAGC TGATTGAGGA TTATGCCCTG CTGGGCGACG GCGAGACCGC TGCGCTAGTG GGTAAGGACG GTTCGATCGA CTGGTTATGC TGGCCGCGTT TTGACGACGA CGCATGTTTT GCGGCGCTGC TCGGGACAAA CGACCACGGT CATTGGTCGC TTTCACCCGC CGGCGAAGTG ACCGGCCAAA GCCGCCGCTA TCAGGAAGAT ACGCTGATCA TGGAAACAGA CTTCCAGACG GCGGATGGCG AGGTGAGAAT CATAGATTTC ATGCCGGTGC GCAAGACTTT TTCGTCGCTT GTACGTATCG TTGCCGGTTT GCGGGGAACC GTGAAGGTGC GCAGCACCTT ACGCCTGCGT TTCGACTACG GCGCGTTGCC CCCATGGAGT GTTGCCGACG GCGACGACAT GATAGCGAAG GTCGGCCCAA ATCTCGTTGC GTTGCGCTCG CCGCTAAGGC TGCACGTGAC TTCCGACTCG ACCGTTGCAA ATTTCGACGT CTCGCAAGGA CAACGAATTG CTTTTGTCCT GAGTTACGCC CGTTCGGAAG ACGGGCCACC AGAGCCTGTA GACGCAGAAG CAGCGCTCAT CTCGACCCAG CATTTCTGGC GCGGCTGGAT TGGCCGTTTT GATAATTCGA AAACGGACTG GCCGTTTCAG GTCCGGCGCT CCCTGATAAC ACTCAAGGCA TTGATTCACC GGCGCAGCGG TGGTCTGGTC GCCGCGCCTA CCACGTCGCT TCCCGAAGCG CCTGGCGGCG AAATGAACTG GGACTATCGC TACTGCTGGC TGCGCGATGC AAGTTTTACC CTCACAGCGT TACTGAATGC CGGCTACCAC GAAGAAGCGG AGGGCTGGCG AAACTGGTTA CTTCGCGCCA TTGCAGGCTC GCCCGATAAC ATGCGGATCA TGTATCGTGT TGACGGCGCA CGGCACCTGC CCGAGTGGAC CGTAGACACG CTGCCTGGTT ACCGTTTTGC GAAACCTGTG CGAATCGGCA ATGCGGCATC GTCGCAGCAT CAGCTCGATG TCTATGGAGA ACTGCTTGAC TGCCTCGATC TTGCCGGGAG GGGCGGGGTC CCGTCGTCGG ACCAGGAATT CGCTATTGAA CAGAGGCTCG TCGAGCATCT CGAGACAATC TGGCAGACGG TCGGCTCGGG AGTGTGGGAG TCGCGAGCGG AGCCACGCCA TTACACTTAT TCGAAAGTCA TGGTATGGGT TGCATTCGAC CGCTTCGTGA GTCGCCACTC GAGGAGCAAT CTCGTTAGTC GTGAAGTGCT GGACCGGATC ACAGCGCTGC GGCAGACGTT GCACGACGAG ATCTGCCGTG AAGGCTGGAA TGAGGGTCTC GGCACGTTCA CGCAACACTA CGGTTCTCAG GCGCTGGACG CCAGTCTTCT TCTGCTGCCA CTCGTCGGCT TTCTTCCCGT CGGCGATCCC CGGATGGACT CGACGATTGC AACGATTGAA CGCGAGCTCT CGGAGGGAGG GCTGATTCGA CGCGAGAAGC CCAACGCAGA TGGACCAAAA GAGGGCGCGT TCCTGGCTTG CTCGGGCTGG ATGGCGGAAT GCATGAAGCT TCAGGGCCGC GACAGGGAGG CGCGGGAGCA GTTCGAGCGT CTGCTCGCAG CCGCCAACGA TGTGGGCCTG CTGGCAGAAG AGTACAACGT GCCCGGCGGT CATCTGGCTG GAAATTTTCC GCAAGCCTTG ACCCACCTCG CCATTGTGAA CGCCGCACTC GCTCTCAGTG GCCCCACGTT GCAGCGCGGT GGCCGGTCCT GCGGCTTTTG A
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Protein sequence | MSKLIEDYAL LGDGETAALV GKDGSIDWLC WPRFDDDACF AALLGTNDHG HWSLSPAGEV TGQSRRYQED TLIMETDFQT ADGEVRIIDF MPVRKTFSSL VRIVAGLRGT VKVRSTLRLR FDYGALPPWS VADGDDMIAK VGPNLVALRS PLRLHVTSDS TVANFDVSQG QRIAFVLSYA RSEDGPPEPV DAEAALISTQ HFWRGWIGRF DNSKTDWPFQ VRRSLITLKA LIHRRSGGLV AAPTTSLPEA PGGEMNWDYR YCWLRDASFT LTALLNAGYH EEAEGWRNWL LRAIAGSPDN MRIMYRVDGA RHLPEWTVDT LPGYRFAKPV RIGNAASSQH QLDVYGELLD CLDLAGRGGV PSSDQEFAIE QRLVEHLETI WQTVGSGVWE SRAEPRHYTY SKVMVWVAFD RFVSRHSRSN LVSREVLDRI TALRQTLHDE ICREGWNEGL GTFTQHYGSQ ALDASLLLLP LVGFLPVGDP RMDSTIATIE RELSEGGLIR REKPNADGPK EGAFLACSGW MAECMKLQGR DREAREQFER LLAAANDVGL LAEEYNVPGG HLAGNFPQAL THLAIVNAAL ALSGPTLQRG GRSCGF
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