Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6295 |
Symbol | |
ID | 6277330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2557229 |
End bp | 2558206 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642617350 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001889993 |
Protein GI | 187920961 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.273902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCC CTACCCTGTC CGTGCAGAAT TTGCGCACGC ATTTCTTTAC CGGCGCCGGC GTCGCGAAAG CCGTCGACGA CACGAGTTTC GATGTCGCGC CAGGCGAGAT CGTCGGCCTC GTCGGCGAAT CCGGCTCCGG CAAATCGATT ACGGGCTTCT CCGTGCTCGG GCTGATCGAC GCGCCAGGGC GCATTGTCGC CGGCCGCGTA CTATTCAAAG GCGAAGACCT GACGACGCTC ACGCCTGAAG CGCTGCGCCG CTTGCGCGGC AATCGCATCG CGATGATCTT CCAGGATCCG ATGATGACGC TGAACCCGGT TCTGCGCATC GACACGCAGA TGATCGAGGC GGTCCAGGCC CACACGCGCG TATCGAAGCA CGCAGCGCGG CAACGGGCGC GCGACGCCCT GGCGTCGGTC GGCATTCCGT CGCCGGACGA ACGTTTGCGC GCGTATCCGC ACCAGTTATC GGGCGGCATG CGGCAGCGTG TGGCGATTGC GATCGCGCTG CTGCACGACC CGGAACTGAT CATCGCCGAC GAACCGACCA CCGCGCTCGA CGTCACGATT CAGGCGCAGA TTCTCGCGGA AATGCAGAAG CTGTGCGCCC GCTCGCATAC CGCCATGGTG TGGGTCAGCC ACGATCTTGC CGTGGTCGCG GGGCTGGCGG ATCGCATTTG CGTGATGTAC GCCGGCCGGG TCGTCGAAAC GGGCAGCGTC GACGAGATTC TCGAACGACC GCGCCACCCG TACACGATCG GGCTGATCGA CTCCTTGCCC GAAAAAGCCC GGCGCGGCGA GTCGCTCACG CAGATTCCGG GCATGGCGCC GAGCGCGCTC AAGCTGCCGG TGGGCTGTGC GTTCGCGCCG CGCTGTGTGT ACGCCACGTC GTTGTGCCGC AGCGCCGAGC CGCCCGTCAC CGGCGAAGGC ACGCATCTGT TCCGCTGTTT CCATCCCCGT TCCGGAGCGC CCGCATGA
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Protein sequence | MSTPTLSVQN LRTHFFTGAG VAKAVDDTSF DVAPGEIVGL VGESGSGKSI TGFSVLGLID APGRIVAGRV LFKGEDLTTL TPEALRRLRG NRIAMIFQDP MMTLNPVLRI DTQMIEAVQA HTRVSKHAAR QRARDALASV GIPSPDERLR AYPHQLSGGM RQRVAIAIAL LHDPELIIAD EPTTALDVTI QAQILAEMQK LCARSHTAMV WVSHDLAVVA GLADRICVMY AGRVVETGSV DEILERPRHP YTIGLIDSLP EKARRGESLT QIPGMAPSAL KLPVGCAFAP RCVYATSLCR SAEPPVTGEG THLFRCFHPR SGAPA
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