Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6284 |
Symbol | |
ID | 6277455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2543665 |
End bp | 2544939 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642617339 |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001889982 |
Protein GI | 187920950 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGCG ACATCACCGT CACCCAGGTG CGAATCACGC CGATCGCCTT CCGCGACGGC CCTCTGCTCA ACGCTGCCGG CATCCACGAG CCGTGGGCAT TGCGCGCCAT CGTCGAACTG GAGACGAGCG ATGGCCGCGT GGGTATCTCG GAGACATATG GTGACGAGCC GATGCTGCGC GTGCTCGAGC AGGCCAAGGC GCTGGTGATC GGCCTGTCAC CGTTCGACCT GAACCGGATG GAGGAACGCG TGCGTGCGGC GATCAAGCCG AGCTCGGGTG CGATCGAATT CGAACTCGCC CCCGGCTCGC ATTCGGCCAA GAACGCGCCG AAAGTCATCA GCACGCTCGA AGTCGCGATG CTCGACCTGC AGGGGCAAAT CGTCGGTGCG CCGATCGTCG ATCTGCTCGG CGGTAAGGTT CGCGACGCAG TGCCCTACAG CGCCTACCTC TTCTTCAAGT ACGCGGAGCA CATCGACAAG CCCTATGCGC CCGATGCCTG GGGCGAAGGC CTTAGCGCGG ACCAGATCGT CGCGCAGGCG CGTCGCATGA TCGACTTGTA CGGCTTCCAG AGCATCAAGC TCAAGGGTGG CGTGTTCGAG CCGGCGCACG AGATCGCATG CATGCGTGCG CTGCATCGGG CTTTCCCCGG CGTGCCGCTG CGCCTCGATC CGAACGCCAA CTGGACGCTA GAAACGAGCA TCGCAGCCGC CCCCGAACTC GACGAGTTGC TCGAGTATTA CGAAGACCCG TGTCCGGGGC TCGCAGGCAT GGCCGAACTG GCAAAACACA CTCGCCTGCC GCTCGCGACC AACATGGTGA TCACGACCAT GGAAGACTTC CGCCGCGGCG CCGAGATGGG TTCGGTCAAG GTGTTGCTGT CGGATCATCA CTACTGGGGT GGTCTGCGCG CGACCCAGAC GCTCGCGCGC ATGTGCAAGT TGTGGGATCT CGGCATGTCG ATGCACTCGA ACTCGCACCT CGGCATTAGC TTGATGGCGA TGACCCACGT CGCGGCGAGC ATTCCTAATC TGACGTATGC GTGCGACACG CATTACCCGT GGCAGGAAGA AGAAGTCATC AAGGGTGGCC GCGTGAGCTT CGACAATGGT GCGGTGCGCG TGCCCAGCGC ACCGGGCCTC GGCGTCGAAC TCGACCGTGA GCGGCTGGCT GAATTGCATG CTCAGTATCT AACGTGCGGC GTGCGCAATC GCGACGACTT GAAGCAGATG CAGAAGTACG ACCCGAGTTT CAGTGGTAAG AACCCGCGCT TCTGA
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Protein sequence | MTRDITVTQV RITPIAFRDG PLLNAAGIHE PWALRAIVEL ETSDGRVGIS ETYGDEPMLR VLEQAKALVI GLSPFDLNRM EERVRAAIKP SSGAIEFELA PGSHSAKNAP KVISTLEVAM LDLQGQIVGA PIVDLLGGKV RDAVPYSAYL FFKYAEHIDK PYAPDAWGEG LSADQIVAQA RRMIDLYGFQ SIKLKGGVFE PAHEIACMRA LHRAFPGVPL RLDPNANWTL ETSIAAAPEL DELLEYYEDP CPGLAGMAEL AKHTRLPLAT NMVITTMEDF RRGAEMGSVK VLLSDHHYWG GLRATQTLAR MCKLWDLGMS MHSNSHLGIS LMAMTHVAAS IPNLTYACDT HYPWQEEEVI KGGRVSFDNG AVRVPSAPGL GVELDRERLA ELHAQYLTCG VRNRDDLKQM QKYDPSFSGK NPRF
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