| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6261 |
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| Symbol | |
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| ID | 6277588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2515527 |
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| End bp | 2517767 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642617316 |
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| Product | exopolysaccharide transport protein family |
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| Protein accession | YP_001889959 |
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| Protein GI | 187920927 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.7097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAA CTAAATTGCC TCCCACGGGG GCACCTGATA GTGAAGAAGA ACTGGATTTC
GTGACGATTC TCGACGTGCT GATAGAAAGC CGTTGGCTGA TCGGCATTGT CGTTGCCTTC
TTCGTCGTGA CCGGCACGCT CTACGCGTTT CTGAGCAATC CGGTCTATGA AGCCGATCTT
CTCATACAGG TCGAAGACAG CCCGGAGAGC TCGGCGGAAA AGGGCTTGCT GGGCGATGTT
TCGTCGTTGT TCGACGTGAA ATCGACGGCT GCCGCCGAAA GCCAGATTCT GGCGTCACGC
CTGGTCGTTA CGCGTGCGGT CGACAACCTC AAACTGTTTA TCGACGCACA GCCGCGCTAC
TTCCCGTTGA TCGGGAACTG GATAGCGCGT CGCAGTCAGG AGTTATCCAC GCCCGGCCTG
TTCGGCATGG GTGGCTACGC GTGGGGGAAC GAACATATCG ATGTGGCGCA GTTCGACGTG
CCGGTATCGC TCGAGGACGA CAAATTCCGG CTGACGGTGA TCGACGCGAC GCACTATCGG
CTGACCGGCG ACGATCTCAC CGACCCATTT GTCGGGCAGA TTGGACGGGT CGAGTCCGTA
CCGTCGTGTT GCGGAAAGAT CCTTCTCTGG GTGAAATCCA TTAAAGGCCG GCCGGATACG
CAGTTCGTGC TTCGACGCCA TTCGCGTATG AAGAGTATCA CCGACTTGCA AAACAACCTC
GACGTTCAAG AGAAAGTGAA GCAATCGGGC GTATTGATTG CGAGTCTGCT CGATACCGAC
CCGGTGCGCG TAGCGGCGGA GTTGAACGCG GTGGGCGATC AGTACATCCG GCAGAACGTC
GAACGAAAGT CCGCTGAAGC TGCGCAATCT CTGGAGTTTC TAAACTCGCA ATTGCCTGTG
ATCAAGCAAC GGCTCGACGA GGCCCAGCAG CGGTATACGG CGGCACGGAA CAAACTCGGC
AGCGTCGACC TGACTGAGGA AGCGAAGGTG GTATTGCAGC AGTCCGTCGA TGCCAAGACC
AAGTTACTCG AACTCGAGGA GCAACGCCAA GGTCTCGCGG CGCGATTCAA TGGACACCAT
CCGGCAATCC GCACGATCGA CTCGCAGATT GCGACATTGC GTCAATACAG CGACGCGGCA
TCCGCCAGAA TCAAGCAATT GCCCGACGTG CAGCAGCAGA TCGTTCAGTT GCAACTCGAC
GTTCAGGTCA ATACCGATCT CTACACGTCG TTGCTGAACA ACTTTCAGCA ATTGCAACTC
GTCAAGGCGG GCAAGACGGG GAATGTGCGT CTGGTCGACA CGGCGGCGAT TCCTGAGAAG
CCGGTCAAGC CGAAAAAGTT GATCGTGCTT GCAGGATCGC TGGTTGTCGG CTTGTTTGCA
GGAGCGGTGC TGGCCTTTGT GCGCAACATG CTGTTCCGCG GCATCAGTGA CCCGACCGAG
CTGGAGCGCC GCACAGGGTT GCACGTGTAC GCGACGATCC CGTTGAGCAA GCGTCAGCAG
GAGATAAGCA GGGTGTCGAG TGCGAAGAAA GCGGGTACAC ACGTTCTCGC CGCCGATTCG
CCCAGCGATC CGGCTATCGA AAGCTTACGA AGTCTGAGAA CTGCGCTGCA GTTTGCGATG
GTGAATGCGC GAAACAACGT CGTACTGTTG ACTGGATCTG CGCCGGCGGT GGGTAAGTCG
TTCGTGTCGG TGAATTTTGC GGCGGTGCTC GCGGCAGGGG GCAAAAAAGT GCTGCTGATC
GACGGTGACT TGCGCAAAGG GCATTTGCAT CAGTCGTTCG GATTTGAACG CGGTGGCGGA
TTTTCAGAGC TGGTGTCGGG GCTTTCGACA TTCGAGCAGG TCGTGCGTCG CGATCTGCTT
GCGCGACTGG ACTTTGTTTC GACAGGAACG CTGCCGCGAA ATCCCGCGGA ACTGTTGTTG
GGTGAGCGGG TGGCGTCTTG TATCGAAGAG CTGTCGAAGC GGTACGACAT CGTGCTGATC
GACTCGGCGC CTACACTCGC AGCCGCCGAC GCCGGGATTC TCGCGCCGAA TGCCGGCACG
GTGTTCCTGG TCGCCCGGGC GGCGGTGACA AAAGCGGGCG AGATCACGGA GTCGGTCAAG
CGGCTCGCCC AAAACGGGGT CGAGGCAAAC GGCGTACTCT TTAACGGGCT CAATCTGTCG
CACGCACGGT ATGGCTACGG CTCCAAATAC GGCTCATATC GCTATGCAGC CTATGAATAC
GGTGGCGAGA CGCGTAGCTA G
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| Protein sequence | MTQTKLPPTG APDSEEELDF VTILDVLIES RWLIGIVVAF FVVTGTLYAF LSNPVYEADL
LIQVEDSPES SAEKGLLGDV SSLFDVKSTA AAESQILASR LVVTRAVDNL KLFIDAQPRY
FPLIGNWIAR RSQELSTPGL FGMGGYAWGN EHIDVAQFDV PVSLEDDKFR LTVIDATHYR
LTGDDLTDPF VGQIGRVESV PSCCGKILLW VKSIKGRPDT QFVLRRHSRM KSITDLQNNL
DVQEKVKQSG VLIASLLDTD PVRVAAELNA VGDQYIRQNV ERKSAEAAQS LEFLNSQLPV
IKQRLDEAQQ RYTAARNKLG SVDLTEEAKV VLQQSVDAKT KLLELEEQRQ GLAARFNGHH
PAIRTIDSQI ATLRQYSDAA SARIKQLPDV QQQIVQLQLD VQVNTDLYTS LLNNFQQLQL
VKAGKTGNVR LVDTAAIPEK PVKPKKLIVL AGSLVVGLFA GAVLAFVRNM LFRGISDPTE
LERRTGLHVY ATIPLSKRQQ EISRVSSAKK AGTHVLAADS PSDPAIESLR SLRTALQFAM
VNARNNVVLL TGSAPAVGKS FVSVNFAAVL AAGGKKVLLI DGDLRKGHLH QSFGFERGGG
FSELVSGLST FEQVVRRDLL ARLDFVSTGT LPRNPAELLL GERVASCIEE LSKRYDIVLI
DSAPTLAAAD AGILAPNAGT VFLVARAAVT KAGEITESVK RLAQNGVEAN GVLFNGLNLS
HARYGYGSKY GSYRYAAYEY GGETRS
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