| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6235 |
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| Symbol | |
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| ID | 6277604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2485818 |
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| End bp | 2486450 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642617290 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_001889933 |
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| Protein GI | 187920901 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.612124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACG TCCTGATTGC TGACGACCAC GCCGTGGTGC GTGGCGGCCT GAAACAGATT
ATCGCGACGA CCACGGATAT CGTCGTCGCC GCCGAAGCCG CGCAAGGTTC GGAAGTGCTC
GACCGGCTGC GCGCGAGGCG CTTCGACCTC GTGCTGCTGG ACATGACCAT GCCCGGCATC
AGCGGAGTCG ATCTGATCCG GCGCGTACGC GCCGAGCAGC CTCCCTTGCC GATTCTCGTG
CTCAGTATCC ACAACGAGGC GCAAGTCGTG TCGCGCGCGC TGCGCGCCGG CGCGACTGGT
TACGTAACGA AAGACAGCGA CCCGGACGTG CTGCTCGCGG CGATCCGTAA ATTGGCGGGA
GGCGGGCGAT TCATCGACCC CAAACTGGTC GACGCCATGG TCTTCGAAAC GCATTCCGGC
GATGCGCCGC CGCATGAGGT GTTATCCGAC CGTGAATTTC AGGTATTACA GATGCTGGCG
GCCGGTCAAA GCATCAACGA GATTGCCGAA TCGTGTTCGC TCAGCGCCAA GACCATCAGC
ACCCACAAGA TGCGTCTCAT GCAAAAGCTC GGCCTCAACA ACAACGCCGA GCTGATCCGG
TATGCGGTCA GGCACGGTCT GGTGACGGAG TGA
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| Protein sequence | MIDVLIADDH AVVRGGLKQI IATTTDIVVA AEAAQGSEVL DRLRARRFDL VLLDMTMPGI
SGVDLIRRVR AEQPPLPILV LSIHNEAQVV SRALRAGATG YVTKDSDPDV LLAAIRKLAG
GGRFIDPKLV DAMVFETHSG DAPPHEVLSD REFQVLQMLA AGQSINEIAE SCSLSAKTIS
THKMRLMQKL GLNNNAELIR YAVRHGLVTE
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