| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6210 |
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| Symbol | |
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| ID | 6277561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2460099 |
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| End bp | 2461883 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617265 |
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| Product | Gluconate 2-dehydrogenase (acceptor) |
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| Protein accession | YP_001889908 |
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| Protein GI | 187920876 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.1943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACA TCAGTAAACC CAAAGTGGAC GCGGTGGTGG TCGGCATGGG CTGGTCCGGT
TCGATCATGG CGATCGAACT GGCGGACGCC GGCCTCACCG TGGTTGGCCT CGAACGCGGC
GAAAACCGCG ATACATACCC CGACTTCGCG TATCCGAAGG TCGCCGACGA ACTCACTCAC
GTGCAGCGCT TCAAGCTGAT GCAAAGCCTC GCGCACGAGA CCGTCACGAT CCGCCGCCAG
GCGCAGGAAG TCGCGCTGCC GTTGCGTCAA TACGGCGCCT TTCTGTTCGG CGACGGTGTC
GGCGGATCGG GCGTGCACTG GAACGGCTTT ACATATCGCG CGACCGAAGC TGAGCTGAAA
CTGCGCAGCC ACTACGAACA GCGCTACGGC AAGGGCTTCA TTCCCGACGA CATGACGATT
CAGGACTGGC CCGTCAGCGC CGCCGAGCTC GAGCCGTTCT ACGATCGCTT CGAATATGTC
GCCGGCACGT CGGGCAAGGC GGGCAATCTC AACGGACAAT CGGTCGGCGG CGGCAATCCA
TTCGAAGCGC CGCGCTCGCG CGATTACGCG TTGCCGCCCT TACCCACTGC GTATCCGTCG
ATGCTGTTCG ACCAGGCCGC GCGCGAAGTG GGCTATCACC CGTATCCGAC GCCCGCGTCG
ATCGCATCGA AGGCCTACAC GAATCCGTAT GGCATGCAGC TAGGGCCGTG CAATTTCTGC
GGCTACTGCG AACTGTTTGG CTGCTACATG TTTTCGAAAG CGTCGCCGCA GTCTTGCATT
CTTCCGGCGC TCGCGAGAAA GCCGAATTTC GAACTGCGCG ACCGTTCGGC AGTCGTGAAA
GTCAATCTCG ACTCGACCGG CAAACGCGCC ACCGGCGTCA CCTATATCGA TGCTCAAGGA
CACACTGTCG AGCAACCGGC AGATATCGTC GCACTGTGCG CTTACCAGAT GCACAACGTG
CGCCTGCTGC TGTTATCGGG TATCGGTAAG CCGTACGATC CGGCCACCGG AGAAGGCACT
GTCGGCAAGA ACTACGCCTA CCAGAAGAAC AGCAAGATCC AGGTCTTCTT CGACAAGGAC
GTCGCAATCA ATCCGTTCAT CGGCTCGGGA GCGGGTGGTG TCGTTTATGA CGATTTCAAT
GCCGACAACT TCGATCATGG TCCGCTGAAT TTCATCGGCG GCGCGATTAC CTTTGCGACG
GTGACGGGTG GCCGTCCGAT CGCGCAGGCA CTCGTGCCGC CCGGCACGCC GAAGTGGGGC
TCGGGGTGGA AAAAGGCCGT GAAAGACCAC TATCTGCATT CGTTCGCCAT CTCCACGCAG
GGCTCGGTGA TGTCGTACCG CGACAACTAT CTCGACCTCG ATCCGACTTA CAAGGACGCA
TACGGCCTGC CCCTATTGCG CATGACGTTC GACTGGAAAG ACAACGAAGG CCGCATGACG
CAGTTCGTCA GCCACAAAGC CGCCGATGTT GCGCGCGCGA TGAACCCGAA GCCGCAATCG
GTTGCAATCA ACGCGGGCAA GCCGGGCGAT CACTTCGATG TCGGCCCATA TCAGAGCACG
CACACGACCG GTGGCGCGAT TGCGGGCGAC CGGCCGGACA ACAGCGTGGT GAATAAGTAT
CTTCAGTCGT GGGATGTCCC GAATGTGTTC GTGACCGGCG CCTGCTCGTT TCCGCAAAAT
CTCGGCATCA ATCCGACTGG CACGATCGGC GCCATGACGT ATTACGCGGC GAAGACGATC
CGCGAGACGT ATCTGAAGAA TCCCGGCCCT CTGGTTCAGG CGTGA
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| Protein sequence | MANISKPKVD AVVVGMGWSG SIMAIELADA GLTVVGLERG ENRDTYPDFA YPKVADELTH
VQRFKLMQSL AHETVTIRRQ AQEVALPLRQ YGAFLFGDGV GGSGVHWNGF TYRATEAELK
LRSHYEQRYG KGFIPDDMTI QDWPVSAAEL EPFYDRFEYV AGTSGKAGNL NGQSVGGGNP
FEAPRSRDYA LPPLPTAYPS MLFDQAAREV GYHPYPTPAS IASKAYTNPY GMQLGPCNFC
GYCELFGCYM FSKASPQSCI LPALARKPNF ELRDRSAVVK VNLDSTGKRA TGVTYIDAQG
HTVEQPADIV ALCAYQMHNV RLLLLSGIGK PYDPATGEGT VGKNYAYQKN SKIQVFFDKD
VAINPFIGSG AGGVVYDDFN ADNFDHGPLN FIGGAITFAT VTGGRPIAQA LVPPGTPKWG
SGWKKAVKDH YLHSFAISTQ GSVMSYRDNY LDLDPTYKDA YGLPLLRMTF DWKDNEGRMT
QFVSHKAADV ARAMNPKPQS VAINAGKPGD HFDVGPYQST HTTGGAIAGD RPDNSVVNKY
LQSWDVPNVF VTGACSFPQN LGINPTGTIG AMTYYAAKTI RETYLKNPGP LVQA
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