Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6175 |
Symbol | |
ID | 6277301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2424856 |
End bp | 2426145 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642617230 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001889873 |
Protein GI | 187920841 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCAA TCCATCCATC GGCCGCCGGC GATCCTGCCT CAGCGCTCTA CAGCAAGCTC AACTGGCGGC TGCTGCCGTT TCTCGTGACT TGCTACATGT TCGCGTATCT GGACCGCGTC AATGTCGGCT TCGCCAAGCT GCAGATGCAG ACCGACCTGG GTTTTTCGGA CGCTGCATAC GGCGTGGGCG CGGGCATCTT CTTCATCGGC TACGTGCTGT TCGAACTGCC GAGCAATCTC ATGCTGCCGA AAGTCGGCGC GCGCCGAACC TTCAGCCGCA TTCTCGTGCT GTGGGGCATC ACGTCGGCGT GCATGCTGTT CGTGCGCAGC GTGCCGGCCT TTTATGCCAT GCGATTTCTG CTCGGCGTGT TCGAGGCGGG CTTCGCGCCG GGCATGATCT ATTACCTGTC GTGCTGGTAT GGACCGGCGC GGATGGCGCG CGCCATTGCG CTGGTGTTCG TCGCCGGGCC GCTGGGCGGA ATTGTCGGCG GCCCGGTGTC CGCATGGCTC ATGACGAGCC TTTCCGGTGT CGGCGGCCTG GCCGGCTGGC AGTGGATGTT TCTCGTGGAA GGCCTGCCGT GCATTGCACT CGGCCTGCTG ACGCTGCGCG TGTTGTCCGA CCGGCCTGAG CAGGCGCGCT GGCTGAACGA CGACGAAAAG TTGCTGCTGG GGCGCGAAAC CGCGCCGACC GAACATCGCG CGGACTCGTT CAAGGCCGTG TTGAAGAGCC CGAGAGTCTA TGTGCTCGCG TTCGCTTACT TCAGCATCAT CTTTCCCATC TATGCCATCA GCTTCTGGTT GCCGACGCTG CTGAAAGAGC AGGGCGTGAG CGATACGATC CGCCTCGGCT GGTACAGCGC GATTCCGTAT GTCGTGGCCG CCGTCTGCAT GTACCTCGCG GGCCGCAGCT CGGACCGGGT CGGCGAGCGC CGCTACCATT GCGCGATTCC GGCGCTCGGC GCGGCGATCT GCCTGATCGC GGCGATCTTC GCCGACGGCA ATGTGATGCT CACACTCACG GCGTTGACGC TGGGAACGGC TTGCCTCTGG ATGGCCTATA CGGTTTTTTG GGCCATTCCG TCCCAGCTTG TCGAGGGAAC GGCGGCGGCA GGCGGCATCG CGCTTATCAA TACCGTGGGC TTGTCCGGCG GCTTCTGGGG GTCGGCGGTG GTCGGCTGGG CCAAGGCATC GACCGGCAGC ATGCATGCCG GTCTCTTCGT CATGGCCGGC GCGGCCGCGT TGGCCGCCAT TCTGATATTG ACCGGCAAGC TGACGCTCAA GCAGGACTGA
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Protein sequence | MSAIHPSAAG DPASALYSKL NWRLLPFLVT CYMFAYLDRV NVGFAKLQMQ TDLGFSDAAY GVGAGIFFIG YVLFELPSNL MLPKVGARRT FSRILVLWGI TSACMLFVRS VPAFYAMRFL LGVFEAGFAP GMIYYLSCWY GPARMARAIA LVFVAGPLGG IVGGPVSAWL MTSLSGVGGL AGWQWMFLVE GLPCIALGLL TLRVLSDRPE QARWLNDDEK LLLGRETAPT EHRADSFKAV LKSPRVYVLA FAYFSIIFPI YAISFWLPTL LKEQGVSDTI RLGWYSAIPY VVAAVCMYLA GRSSDRVGER RYHCAIPALG AAICLIAAIF ADGNVMLTLT ALTLGTACLW MAYTVFWAIP SQLVEGTAAA GGIALINTVG LSGGFWGSAV VGWAKASTGS MHAGLFVMAG AAALAAILIL TGKLTLKQD
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