Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6170 |
Symbol | |
ID | 6277652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2419923 |
End bp | 2421494 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642617226 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_001889869 |
Protein GI | 187920837 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGCGAG CCGAACAGAT CGAACTTGCG CTAGCGCCGA GACCGGAAGG CGTGCCGCTT CAGCGCTGGC TCTACGACGA GCTGCGCCAG GCGATCCTGA CAGCGACGTT GCCACCGTGC GCGCGCCTGC CTTCCACACG CGATCTCGCA GCGAGGTTTC GACTGTCGCG CGGGACGGTG CTGGGCGTTT TCGCGCAGCT TGAGGCGGAA GGGTATCTAT CCGGCGCGGT GGGACGAGGC AGTTTCGTTG CGGCGGAACT GCCGGACCGG CGCATCGACA GCGGCGAGCG GACGTCGCCC GGAAAGCGCG CTGGCAACAA CGGTACGCAA CCGCGCGACG TCGCGTTGTC GACGCGCGGC CGTTTGCTCG CGCGCAGCGC GTTTCAGCTC AGCGGCCGCA CTCATCCGGC GCGCGCGTTT CGCGCCAGCC AGCCCGATCT CGACGCGTTT CCCTTCGAAC TGTGGGCGCG GCTCGCGGCA AACCGGGTGC GTCGCGCGCG GCGGGATCTG CTCGGCGACG GCGAGGCACA AGGATATCGG CCGCTGCGCG AAGTGATCGC CGCTTATGTC GGCCCGTCGC GCGGTATTCG ATGTTCGGCG GACAACGTGG TGGTGTTGGG CAGCGTTCAG CAGGCGATCG ATCTGAGCGC TCGCCTCCTG CTCGATCCCG GCGACACTGC GTGGATGGAA GATCCCGGTT ATCCCGGCGC CCGTTTCGTG CTCGAAGCCG CGGGCGCGCG AGTGATCGGC GTGCCGGTCG ATACAGCCGG CGTCGATGTG TCATGGGCTC GCCAGCACCC CGCGGCAGCG CGTCTCGCCT ATGTCACCGC CGGGCGTCAG GCGCCGCTAG GTCCGCCGCT CGCGCTCGAA CGGCGGCTCT CGCTGCTCGA ATGGGCGCGC GAGCGAGGCG CCATCATCAT CGAGGACGAC TACGACAGCG AGTACCGCTT CGAGGGTCAC CCGCTCGCCG CGATGAAGAG CCTCGACGAC CACGGACACG TGATCTACTG CGGCACCTTC AGCAAACTGC TGTTTCCCGC TTTGAGGACC GCGTACGCGA TCTTGCCCGA CCGATTGATC GAACCGTTCG TGACCGCGCT GTCGTCCACG GCACGGCATG TTCCCACCGA TCAGCAATCC GTGCTGCACG ACTTTATCGC CGACGGCCAT TTCGGCCGGC ACATACGGCG CATGCGCATG CTCTATGGCG AACGAGCCGA GGCACTGACG TCGGCGCTCG AGCGGCATCT TTCGGGTTTG CTTGCGCTTG CGCCGATCGT GGCGGGCCTC GACGCGCCCG CGTTTCTGCC GCGAGACGCC GACGACACCG ACGCCGCGCG GCGAGCGGCA CGCGAAGGCA TCGAGACGCG TCCGCTGTCG CTATACGCGA TCGACCGTGC CGCGCCGCCG GGGCTCGTGC TCGGATTTGC TTCAATCGGT GTCGAGGAAA TAGAGGCCGG CGTGATTGGT CTTGCTCGGG CGCTGACGCG CCGCAAACGC AACGTTGCAA CAGGATTCGC CGATGCACAC CGATATCCGT CAGGCGTTGA CCGAGTTGCG CCGGACACTT AG
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Protein sequence | MRRAEQIELA LAPRPEGVPL QRWLYDELRQ AILTATLPPC ARLPSTRDLA ARFRLSRGTV LGVFAQLEAE GYLSGAVGRG SFVAAELPDR RIDSGERTSP GKRAGNNGTQ PRDVALSTRG RLLARSAFQL SGRTHPARAF RASQPDLDAF PFELWARLAA NRVRRARRDL LGDGEAQGYR PLREVIAAYV GPSRGIRCSA DNVVVLGSVQ QAIDLSARLL LDPGDTAWME DPGYPGARFV LEAAGARVIG VPVDTAGVDV SWARQHPAAA RLAYVTAGRQ APLGPPLALE RRLSLLEWAR ERGAIIIEDD YDSEYRFEGH PLAAMKSLDD HGHVIYCGTF SKLLFPALRT AYAILPDRLI EPFVTALSST ARHVPTDQQS VLHDFIADGH FGRHIRRMRM LYGERAEALT SALERHLSGL LALAPIVAGL DAPAFLPRDA DDTDAARRAA REGIETRPLS LYAIDRAAPP GLVLGFASIG VEEIEAGVIG LARALTRRKR NVATGFADAH RYPSGVDRVA PDT
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