| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6145 |
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| Symbol | |
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| ID | 6277556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2394618 |
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| End bp | 2395394 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617202 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001889845 |
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| Protein GI | 187920813 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.899344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCT CAGGAAAGAC AGCGTTGATT ACCGGTGGGA ATAGCGGCAT TGGTTTCGTC
ACGGCGAAGC TGCTGATTGC CGAAGGCGCA AAGGTGGTGA TCACCGGCCG CGACAGTGCG
AAGCTGGATC AGGCCGTGTC GGAACTCGGC GAAAACGCAC TGGGCGTGCG GGCCAATCTG
GACAACGAAG CGGACATCGA CGCGTTGTTT GAACAGATCA AGAGCAAATT CGGCTCGCTG
GACATCGTGT TCGCGAATGC CGGCATCTCG GGTCCGACGC CGCTCGGCGG CACGACGGCC
GCGGCGTTCG AGGCCATTCT CCGCACCAAT CTGACGGCCG TCTTTCTGAC GGTGCAAGCC
GCATTGCCGC TGATGAGCGC GGGTGGCGCG GTCGTATTGA ACGGCTCCGT GATGCGTGAA
CTCGGCTCGC CTGGTTCTTC GGCATATTCG GCCACCAAGG CGGGCATCAC GGGTATGGCG
AAGGTCTTCG CGTCGGAGTT GGTGCAGCGT GGTATTCGCG TGAATACGGT GATCCCTGGC
GGCACGCGCA CGCCGATCTG GACGCGTGGC GCGCGCGAGG GCGCGACGCT CGACGCAACC
GAACAGGCGC TCGCGCCGCG CGTGCCGATG GCACGCCTCG CCGCGCCGGA AGAAGTCGCG
GCAGCAGTGC TGTTCCTGGC TTCCAGCGAC GCGTCGGGAA TGACCGGCGC GGAAATCGTC
GTGGATGGCG GCACGATCGG GGCACCGTGG GGCGCGCCGA TTTTCCGCCA AGCCTGA
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| Protein sequence | MRFSGKTALI TGGNSGIGFV TAKLLIAEGA KVVITGRDSA KLDQAVSELG ENALGVRANL
DNEADIDALF EQIKSKFGSL DIVFANAGIS GPTPLGGTTA AAFEAILRTN LTAVFLTVQA
ALPLMSAGGA VVLNGSVMRE LGSPGSSAYS ATKAGITGMA KVFASELVQR GIRVNTVIPG
GTRTPIWTRG AREGATLDAT EQALAPRVPM ARLAAPEEVA AAVLFLASSD ASGMTGAEIV
VDGGTIGAPW GAPIFRQA
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