Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6133 |
Symbol | |
ID | 6277481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2377847 |
End bp | 2378482 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642617190 |
Product | isochorismatase hydrolase |
Protein accession | YP_001889833 |
Protein GI | 187920801 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.807443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAAG AACTCTTGAC CCCCGATACA TGTGCGGTTG CCCTGATCGA CTACCAGCCG CAGATGTTCT TCGGAACGAC CTCGCATGAG CGGACCACCA TCCTGCACAA CGTTCAGGCG ATCGCGAAGG CCTCGAAGCT CTTCAAGGTC CCGACGATCC TGACTACGGT GGCCGCCAAG TCGTTCAGCG GCGACATGGT GCCGGAAGTG CAATCGGTTT TCCCGGAGTA CACGCCGATC GATCGCACGT CGATGAACTC GTGGGAAGAC GTGAATTTCC GCAAGGCCAT CGAGGCGACC GGCCGCAAGA AAATCGTGCT CGCCGGTCTG TGGACGGAAG TGTGCGTGTC GTTCCCGACC ATCCAGATGA TCAACGAAGG CTACGAAATC TATGTGCCGA CCGACGCCTG CGGCGACATC ACCACGGAAG CGCACGAACG CGCGGTGCAA CGCATCATCC AGGCCGGCGC CGTGCCGATG ACCTCGTTCC AGTACATGTT CGAACTGCAG CGCGACTGGG GACGCAGCGA GACGTACGAA GGCTGCATGG ACATCCTGAA GGCGCACAGC GCCTATGGCA TCGGCGTGCG TTACGCCAAG TCGATTCTCG GCGAGCACGC GAGCGAAGCG GGCTGA
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Protein sequence | MPKELLTPDT CAVALIDYQP QMFFGTTSHE RTTILHNVQA IAKASKLFKV PTILTTVAAK SFSGDMVPEV QSVFPEYTPI DRTSMNSWED VNFRKAIEAT GRKKIVLAGL WTEVCVSFPT IQMINEGYEI YVPTDACGDI TTEAHERAVQ RIIQAGAVPM TSFQYMFELQ RDWGRSETYE GCMDILKAHS AYGIGVRYAK SILGEHASEA G
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