Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6120 |
Symbol | |
ID | 6279889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2361239 |
End bp | 2362093 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642617177 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001889820 |
Protein GI | 187920788 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACAT CGGGTAAAAG CGAGCCGGAA GTGGTCTGCT GGCGCGACGG CGCGCTCGAT GGCGCATGTC TCGCGAGCGC CCGTTACGGC AATCACAAGT TCGACCGGCA TCTGCACGAC GAACTCGTCA TTGTCATGAC CGAAACCGGC GCGGGCCAAT GTCATACGCG CGCGGGCAGC GAGGTTGCCG GCCCCGGCAG CGTGCTGGTT TTCGGGCCGG GCGAATACCA TAGCGGCGAG GTCTGGGAAG GCCGCGAATG GATTTATCGC GCGATCTATC TGGACATGGA AGGGCTCGGC GCGCTCAGCG CCGTCTTCTC GCCCGACGCT CGCAGCGACA AACCGCTGCT GATTCCGCCG GGGCTGTATC AGGACCCGCA CCTCGCGGGT CTGCTGGTCA AGGCGCATGC GAGCCTGGAC GAACAGCGCG CCGTGTCGCT GATGGAGCGT CAGGCGAACT GGTGGGCTGC GATGGGAATG CTGGTCGGGC GCTATGGGCG CGCGGGTGAA GAGGCGGGAG AGCCCCGGCG CGAGGCGCGC AAGATGGAGC AGGTGCGCGA GTACGTCGCC GCCAATTACG AGCGCGATAT CTCGGTCGAT GAACTGGCGG AACTGGTGGG TTTGAGCCGT TACTACCTCA CGCGCGCATT CTGCAAGGAG TTCGGGCTGC CGCCGCACGC CTACGCGACG CAAGTGAGGC TATTGGCGGC GAAGCGCATG CTTGCCTCAG GGCAGAGCGC AGCGACGGCT GCGGCGGCAG TGGGCTTTTA CGATCAAAGC CATCTCAACC GGCTGTTCAA GCGGGCTTAT GGGATCACGC CCGGGGCGTA TGCGGCGTTG AAGCCGGGGC ATTAG
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Protein sequence | METSGKSEPE VVCWRDGALD GACLASARYG NHKFDRHLHD ELVIVMTETG AGQCHTRAGS EVAGPGSVLV FGPGEYHSGE VWEGREWIYR AIYLDMEGLG ALSAVFSPDA RSDKPLLIPP GLYQDPHLAG LLVKAHASLD EQRAVSLMER QANWWAAMGM LVGRYGRAGE EAGEPRREAR KMEQVREYVA ANYERDISVD ELAELVGLSR YYLTRAFCKE FGLPPHAYAT QVRLLAAKRM LASGQSAATA AAAVGFYDQS HLNRLFKRAY GITPGAYAAL KPGH
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