Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6068 |
Symbol | |
ID | 6279567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2304871 |
End bp | 2306454 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642617128 |
Product | TPR repeat-containing protein |
Protein accession | YP_001889771 |
Protein GI | 187920739 |
COG category | [R] General function prediction only |
COG ID | [COG0457] FOG: TPR repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.115417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACCG ATTCTGCTTT GCCATTCGAA AAAACCCTTA ACGCCTGGTT CAATCAAGCC GAGGAGGCGC GTCTCGCAGG CGAGTTCGAC ACAGCCCGAA CGCTGCTCGA CCGGATCATC GGGCAAGACC CCGCACATGC GGACGCGTTG TACACGTATG GGCTCGTTGC GCTTGCATCG AATCAACTCG AGTCGGCCCA AAGCTGGGTG GAACGCGCGC TCGAAGTGCG TTCGGATCCG GCGTATTACG GCACGTTGTG TATTGTCCAG ATCAAACTGC GTGACTATGC ACGCGCTTTG CAAACGGCCG AGTGCGGGCT CGCGCTCGAA CCGGCGTCGC TGCCGCTTAA CTTCTTCATG GCCGTCATCC TGCAAGTGCA GGGACGTTCC GACGATGCCG CCGTCGCCTA CCATCGCTTG CTCGAACTCC GGCCGGACCA TCCGCAAGCG CTTGTTAATC TGGGCGTGGT CGTGAAGGAC CTCGGCTCGC TGAGTGAGGC CGAGCGGCAT CTCAGGCAAG CCATCGCGCT CGCGCCGTCT TACCTCGGCG CGCGCGCAAG CCTCAGTCAG GTCCTGTTGG CCGCCGGCCG TTATGAAGAA GCCTGGCCGT ATTTCGAAGA CCGTTGGGCC AATTTCGTGG ATGCCGACGG GCGGCCCGCA TCGGTGCGCC CGACACTGCC GCTGCCTCAA TGGAAAGGCG AGCGCCTCGA CATCGCGAGC GCCAGCCAGG GAATGCCCGA ATACGGCGCG CGTCTGCTTG TCATTCCAGA GCAGGGTCAT GGCGACAGCC TGCAGTTCGT GCGCTATCTG CCGATGGCGC TCGAACGTTT TGCGCGCGTC GGCTATATAT GCCCGCCATC GCTGCGGCGC TTGTACGAAG AGTCTTTCGC GCATTTGCCG GGCCTCATGA TGCTCGACGA CGGCCTATCC GACCTGAGCG ACTGGGACTG GCATTGCCCT TTGATGTCAC TGCCAATGGC GTTCGGCACG CGGCTCGACA ACATTCCCGC CGCCACGTAC CTGCATGCGG ATGCCGCCCG CTCGGCCTCA TGGCGCGCGC GGCTTGCCAT GTTGCCCGAT GCCGGCTTGC CGCGTGTCGG TCTGGTGTGG GCCGGTGGCC ATTCAGGTCT GACCGAAGAC CGGGCGCGTA GTTTGAATCC CGCGCAAGTC GCGCCATTGC TCGCGTTACC CAATGTGCGC TGGATCAGCC TGCAAAAGAC GGATGACCCC GCGAAGCGCG CCGATGCCGT AACACACGCG CCTTTGACGG ACTGGATGGA CGACGCGACG GACTTCGCTG ATACCGCCGC GCTGATCGAC AACCTCGATC TCGTGATCTC CGTCGACACG TCGGTTGCAC ATCTGGCCGC GGCAATGGGC AAGCCGGTGT GGCTGCTCAA CCGCTTCGCC GGGTGCTGGC GCTGGTTGCG CGATCGCGAC GACAGCCCAT GGTATCCCAG CGTGCGGCTC TTCACGCAGT TGCAACGCGG CGACTGGGAC GGCGTGCTCG AGCGAGTCGC CGAGGCTTTG CTCCACGCGA CCGGTGCAAC CTATAGGAAG TCTTACCGAT CCTTTGTGCG TTAG
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Protein sequence | MPTDSALPFE KTLNAWFNQA EEARLAGEFD TARTLLDRII GQDPAHADAL YTYGLVALAS NQLESAQSWV ERALEVRSDP AYYGTLCIVQ IKLRDYARAL QTAECGLALE PASLPLNFFM AVILQVQGRS DDAAVAYHRL LELRPDHPQA LVNLGVVVKD LGSLSEAERH LRQAIALAPS YLGARASLSQ VLLAAGRYEE AWPYFEDRWA NFVDADGRPA SVRPTLPLPQ WKGERLDIAS ASQGMPEYGA RLLVIPEQGH GDSLQFVRYL PMALERFARV GYICPPSLRR LYEESFAHLP GLMMLDDGLS DLSDWDWHCP LMSLPMAFGT RLDNIPAATY LHADAARSAS WRARLAMLPD AGLPRVGLVW AGGHSGLTED RARSLNPAQV APLLALPNVR WISLQKTDDP AKRADAVTHA PLTDWMDDAT DFADTAALID NLDLVISVDT SVAHLAAAMG KPVWLLNRFA GCWRWLRDRD DSPWYPSVRL FTQLQRGDWD GVLERVAEAL LHATGATYRK SYRSFVR
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