Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6033 |
Symbol | |
ID | 6279478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2264260 |
End bp | 2264979 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642617093 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001889736 |
Protein GI | 187920704 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTCAG AACTTCAAAC TGAAGCAGTG GCCACACCGT TGACGTTGTC ATTGCAGCCG ATCGGCGCGA GCGCAAGCTT GCGCGATCAG GCGTATGCCA TGCTCCGCCA GGCTATCGCC GACGCGGATA TCTACCAGAA CCGTGAAGAA ATCCGTCTCG ACGAGCGGGT GCTGAGCGAG TCGCTCGGCG TTAGCCGCAC GCCGGTGCGT GAGGCCATGA CGCTGCTCGA ACAGGAAGGT TTTCTGCGCA TGGTGCCGCG CCGCGGCATC TATATCGTGC GTAAGAGCAA GCGTGAAATC GTCGAGATGA TCCAGATGTG GGCCGCGCTC GAAAGCATGG CGGCGCGCCT TGCCACGCTG CACGCCACGG ACGAGGAAAT CGCCCGTCTG CGCCACATGT TCGACAACTT CCGCGACGCG ACGCCGGCTG AACACATCGC CGAGTATTCG GACGCCAACA TCGCGTTTCA CCAGGCGATC GTCGAGTTGT CCAAGTCGCA GATCATTCTC GACACGATCA AGAACATCTT CATCCACGTG CGCGCGATTC GCCGCATGAC CATTTCGCAG AGCGACCGCG CGTCGCGCTC GATCGTGGAT CATTTGCGCA TTATCGAGGC GCTGGAAAAG CGCGATACCG AGCTGGCCGA GCGTCTTACG CGTCAGCATT CGCTCGATCT GGCCGCGTTC GTCGAGGCCA ATTGCGATTT TCTGGATTGA
|
Protein sequence | MSSELQTEAV ATPLTLSLQP IGASASLRDQ AYAMLRQAIA DADIYQNREE IRLDERVLSE SLGVSRTPVR EAMTLLEQEG FLRMVPRRGI YIVRKSKREI VEMIQMWAAL ESMAARLATL HATDEEIARL RHMFDNFRDA TPAEHIAEYS DANIAFHQAI VELSKSQIIL DTIKNIFIHV RAIRRMTISQ SDRASRSIVD HLRIIEALEK RDTELAERLT RQHSLDLAAF VEANCDFLD
|
| |