Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6022 |
Symbol | |
ID | 6279538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2250826 |
End bp | 2251980 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642617082 |
Product | polysaccharide export protein |
Protein accession | YP_001889725 |
Protein GI | 187920693 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.113173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.244063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGG TGAGTTTGTT GGCGAGTGCG TGCGCTGTGG CGCCGGGGAT GCGGATGGAG ACGTCTCACG TGCAGAATAT GACGGGTGCG TCCAATGCTT CGAGCGTTGC TGGAGAAGCC GGCGAAGGCA TGGCCGGCGA ACGGGCAAGT GCAACGAATG GCACGCCGGA CATCGCGATA ACAGAGGTCG ACGCGGCGCT GCTTTCGCAG TTGGCACAAC GTGGAAAACA GCAGCAGAAC GAGCTGTCTC AATTGCTCTC CGGAGTGCCG CGGCCCTACG CGGTCGGGCC CGGTGATGTG CTGCAGATCG TCGTTTGGGA TCATCCGGAA TTCGCTGCCG CACTCGGCTC TTCGCAGACA CAATCGTCCA CGAAGCCGGG AGACCCGCTG TCTGGATTCG TGGTTGACCA GAACGGTGGG TTGACGTTTC CGTATGCGGG CACGCTACAC GTGGCGGGCC TGCGTATCGA AGAGATTCAG CAACGGCTGA GCAGCGCGCT CGCAACATAT TTCGTCAAGC CGCAAGTCAC CGTCCGAATG GCATCCTATC GCGCGCATCA GGTCTACGTC GACGGCGAAG TGCGTAGTCC TGGTGCATTG GCGGTCAACG ACGTGCCCAT GACCCTTTAC GAAGCAGTTA GCCGCGCGGG TGGTTTCAGT GAAACGGCCG ACCAGAGCGA TCTCGTTCTG GTGCGTGGCG ATCACTCTTA TCGCGTGAAT CTGACGCAAA TGCTCGCTCA GGGATTAAGC CCGTCGCGGC TCTATCTGAA CCCCGGTGAT CTGCTGCGTG TGGGCTCGCG TGATGAAAAC GATGCATATG TGATGGGCGA AGTGAACAAA CCGGTTTCGG CTATTCCGCG CCGAACGGGC CGCATGACAT TGGCCGACGC ACTTTCGCAG GCCGGCAGCG TGAATGCCTC GACTGCCGAC GCCGCTCAGA TGTTCGTGAT CCGCGGTTCA CTTCCCGGGA CGCCGCAGGT GTTTCACCTC GATGGTCATT CACCGGTCGC GATGCTGCTT GCGAAGGATT TCGAATTGCA GCCGAAGGAC GTGGTGTACG TGGATGGTAG CGGTCTGGTT CGCTTTAATC GCGTGCTGAG TTTGTTGATG CCGTTGATTA ACACTGGTCT GACGGCGGGA GTCATTGCGA AATGA
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Protein sequence | MTAVSLLASA CAVAPGMRME TSHVQNMTGA SNASSVAGEA GEGMAGERAS ATNGTPDIAI TEVDAALLSQ LAQRGKQQQN ELSQLLSGVP RPYAVGPGDV LQIVVWDHPE FAAALGSSQT QSSTKPGDPL SGFVVDQNGG LTFPYAGTLH VAGLRIEEIQ QRLSSALATY FVKPQVTVRM ASYRAHQVYV DGEVRSPGAL AVNDVPMTLY EAVSRAGGFS ETADQSDLVL VRGDHSYRVN LTQMLAQGLS PSRLYLNPGD LLRVGSRDEN DAYVMGEVNK PVSAIPRRTG RMTLADALSQ AGSVNASTAD AAQMFVIRGS LPGTPQVFHL DGHSPVAMLL AKDFELQPKD VVYVDGSGLV RFNRVLSLLM PLINTGLTAG VIAK
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