Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5989 |
Symbol | |
ID | 6280450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2216171 |
End bp | 2216896 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642617050 |
Product | (2Fe-2S)-binding domain protein |
Protein accession | YP_001889693 |
Protein GI | 187920661 |
COG category | [C] Energy production and conversion |
COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.566254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTCGC ATAACGAAAG TCAGGATCCG GGCGACGTCC CAGCCGCCAT CCCAACCAAA CCTTCACGCC GCCGCTTTCT TCAATCTGCT GCCGCTGCCG CCACGGTCGG GGCGGCACCG CATCTGCGCG CGCAAACCCA AACCCCAACC GCGCCGCCGG CTCAGGTTCA GCAAGCCGTG CCGCCGCGTC CGGTCACGCT GACCGTGAAT GGCCGCGCAT ACACGCTGCA ACTCGAACCG CGCGTGACCT TGCTCGATGC ATTAAGGGAA TACGCGGGCC TGATGGGCAC GAAGAAAGGC TGCGATCGCG GTCAATGCGG CGCATGCACG GTGCTCGCCG ACGGCCGCCG CATCAACTCA TGCCTGACGC TCGCCGTGAT GCATGAAGGC GAGAACATCA CGACGGTCGA AGGGCTTGCC GCCAACGGCG TATTGAGTCC GATACAGCGC GCCTTCATCG AACACGATGC CTTTCAATGC GGTTACTGTA CGCCCGGGCA GTTGTGCTCC GCGACTGCCC TTCTGAACGA ATTCCGCAAC GGCACCGCCA GCACCGTCAC GGCCGATGTC CGCATTCGCC CCGCCCAACT TTCCGACGAA GAAATCCGCG AGCGCATGAG CGGCAACATT TGCCGCTGCG GCGCCTACGC GAATATCGTG GCCGCTGTAC GCGCGGTGCA CGAAGGCGGC GGACCAGTCA GCGGCAACGA CAACCCCAAC GCCTGA
|
Protein sequence | MSSHNESQDP GDVPAAIPTK PSRRRFLQSA AAAATVGAAP HLRAQTQTPT APPAQVQQAV PPRPVTLTVN GRAYTLQLEP RVTLLDALRE YAGLMGTKKG CDRGQCGACT VLADGRRINS CLTLAVMHEG ENITTVEGLA ANGVLSPIQR AFIEHDAFQC GYCTPGQLCS ATALLNEFRN GTASTVTADV RIRPAQLSDE EIRERMSGNI CRCGAYANIV AAVRAVHEGG GPVSGNDNPN A
|
| |