| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5988 |
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| Symbol | |
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| ID | 6277461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2213904 |
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| End bp | 2216027 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642617049 |
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| Product | putative D-(-)-3-hydroxybutyrate-oligomer hydrolase |
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| Protein accession | YP_001889692 |
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| Protein GI | 187920660 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.470652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTCCA CTCTCAGAGT CGAGCCCGCG CAACAACCAG TGCCGGTGGT GCGAACCCTG
GCGATCATGT TGGCCATGTC AGTCGTACTG GCTGCCTGCC ACGGCGGCAA TGACGATAAT
TCGCCGCCGC AAGCGAACAC GCTACCGGGT TTCATTACCG CCTCCTCGGT AAAAATGCAG
GCCTACGACG ACAATACCGA CGACTTGCTT ACCGCGGGCC TCGGCAAAAC CGGCCTCGGG
TCGGCCACGG CGCCGGCCAT TGCCAACGCC GCGCAACCTA CCGCCGCCGA ACTGCGCCGA
CTCGCCATCT GGTCGAACTA TCGCGCGCTC GTCGACATGA CGGCGAACGG CGGCTATGGA
CGCTTCTGGG GGCCGAACGT CGATCTGAAC GGCAACGACA CGCTCGGCGA AGGCAAGATC
GCCGGCAAGG AATATCTGGC TTACGCCGAC GACGGCAGCG GCACGCAGAA CGTCACCATG
CTGGTGCAGA TACCGGCCAG CTTCAATCCG GATCAGCCGT GCATTGTCAC GGCGACGTCA
TCCGGTTCGC GCGGCGTGTA CGGCGCGATT TCGGCGGCCG GCGAGTGGGG GCTCAAGCGC
GGTTGCGCGG TGGCGTACAC CGACAAAGGC AGTGGCAACG GCGCGCATGA ACTGTCGACC
AATCGGGTCA CGCTGATCGA CGGCACCTTG CAGGATGCCG CCGCCGCGGG CAAGGCCAGC
CTCTTCACGG CCAACCTGGC CAACACCGAT CTCGCGACTT ACAACAGCCA GTTTCCGAAT
CGCTACGCGT TCAAGCATGC ACACTCGCAG CAGAATCCCG AGAAGGATTG GGGCAACGAT
ACGTTGGAGG CGATCCAGTT CGCGTATTGG GCGCTCAACG ATTCGTATGG CGCGCTCAAC
GGTTCGACCC GCACGGTGCG TTACGCGGGC GGCAGCATCA CCACGATCGC GGCATCGGTG
AGTAATGGCG GCGGCGCGTC GCTCGCGGCG GCGGAACAGG ACACGTCCGG TTGGATCACC
GCGGTCGTCG TCGGCGAGCC GCAGATCAAT TTGCGTTTGC CCGCGCAGGT GTCGGTGGCT
CAGGGCGGCG TGCCCGTCGG TGCATTCGGC AAGCCGCTCG CCGACTACAT GACGCTCGCC
AACCAGCTGC AACCGTGCGC GGCGCTCGCG CCCGCCGCGG CCGGCGCGCC ATATCTGACG
GCACTGCCAC TCGCCACGAC CACGGCGATT CGCACCGCAC GGTGCGCGTC GCTGGCAAGC
GCTGGCGTGA TCGCGGGCGG GAACGTGACG ACCCAGGCGA TCAACGCGCT CGCGCTGCTG
CATCAGAACG GCTACCAGAC CGACTCCGAT CTGCTGCAAG CGCCGATGTG GGACTCGCAA
GCGGTGCCGG CCGTTGCCGT GACTTACGCG AACGCGTATG CGAAGGCGAG CGTTACCGCC
AACCTTTGCG ACTTCAGCTT CGGCACGACG AGCGCAACCG GAACAGCGGG CGTCACACCG
GCCGTGTCGC CGATGCTCAC GGTGTTCGGC AATGGCAACG GGGTGCCGCC GACCAACGGC
ATCAACCTCG TCTTCAACTC GGGCGGCGGA GCGGCGGACC ACCGGCTGGC GACCCCCGAC
GGCAGTTACG CGGGCGCCTC CTGCCTGCGT ACGCTGTGGA CGAACGGCGC GCTGACCAAC
AGCGTCGAGG CCATTCGCGT GAACGCGAAT CTGCATGGCA AGCCGGCGAT TATCGTGCAG
GGCCGCGCCG ATGCGCTGGT ACCGATCAAC CATGCATCGC GGCCGTATCT CGGCCTGAAT
CAGCTGAGTG AAGGTGGCGC GAGCAAGCTG TCGTTCTACG AAGTGACGAA CGCCCAGCAT
TTCGATGCGT TCCTCGGCGT GGCGGGCTTC GATACGCGCT TCGTGCCGCT GCATTACTAC
AATATCCAGG CGCTCAATCT GATGTGGAGT CATCTGAAGA GCGGTACGCC GCTGCCGCCG
TCGCAGGTGA TTCACACGGT GCCGCGTGGC GGCACGGCCG GCGCCGCGCC CGCGCTGACC
ACCGCCAATC TGCCCGCGAT CGCGGCAAGT CCGGGCATCA ACGCGATCAC CGTGACCAAC
GGCGCCGTGA ACGTGCCGAA CTAA
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| Protein sequence | MKSTLRVEPA QQPVPVVRTL AIMLAMSVVL AACHGGNDDN SPPQANTLPG FITASSVKMQ
AYDDNTDDLL TAGLGKTGLG SATAPAIANA AQPTAAELRR LAIWSNYRAL VDMTANGGYG
RFWGPNVDLN GNDTLGEGKI AGKEYLAYAD DGSGTQNVTM LVQIPASFNP DQPCIVTATS
SGSRGVYGAI SAAGEWGLKR GCAVAYTDKG SGNGAHELST NRVTLIDGTL QDAAAAGKAS
LFTANLANTD LATYNSQFPN RYAFKHAHSQ QNPEKDWGND TLEAIQFAYW ALNDSYGALN
GSTRTVRYAG GSITTIAASV SNGGGASLAA AEQDTSGWIT AVVVGEPQIN LRLPAQVSVA
QGGVPVGAFG KPLADYMTLA NQLQPCAALA PAAAGAPYLT ALPLATTTAI RTARCASLAS
AGVIAGGNVT TQAINALALL HQNGYQTDSD LLQAPMWDSQ AVPAVAVTYA NAYAKASVTA
NLCDFSFGTT SATGTAGVTP AVSPMLTVFG NGNGVPPTNG INLVFNSGGG AADHRLATPD
GSYAGASCLR TLWTNGALTN SVEAIRVNAN LHGKPAIIVQ GRADALVPIN HASRPYLGLN
QLSEGGASKL SFYEVTNAQH FDAFLGVAGF DTRFVPLHYY NIQALNLMWS HLKSGTPLPP
SQVIHTVPRG GTAGAAPALT TANLPAIAAS PGINAITVTN GAVNVPN
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